RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 GAKO14976 1311 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 NSUN4Q96CB9 384 aaKnown RBP24.33■■□□□ 1.49
TSPAN3-210ENST00000561277 UBE2Q2LH0YL09 131 aa24.33■■□□□ 1.48
TSPAN3-210ENST00000561277 RGMBQ6NW40 437 aa24.33■■□□□ 1.48
TSPAN3-210ENST00000561277 CDAN1Q8IWY9 1227 aa24.33■■□□□ 1.48
TSPAN3-210ENST00000561277 EXOC6Q8TAG9 804 aa24.33■■□□□ 1.48
TSPAN3-210ENST00000561277 PIH1D3Q9NQM4 214 aaKnown RBP24.33■■□□□ 1.48
TSPAN3-210ENST00000561277 USP40Q9NVE5 1235 aa24.33■■□□□ 1.48
TSPAN3-210ENST00000561277 BTDP43251 543 aa24.32■■□□□ 1.48
TSPAN3-210ENST00000561277 GSTO1P78417 241 aa24.32■■□□□ 1.48
TSPAN3-210ENST00000561277 SUPT20HL1Q3ZLR7 823 aa24.32■■□□□ 1.48
TSPAN3-210ENST00000561277 MAST2Q6P0Q8 1798 aa24.31■■□□□ 1.48
TSPAN3-210ENST00000561277 ZNF157P51786 506 aaPredicted RBP24.31■■□□□ 1.48
TSPAN3-210ENST00000561277 ANGEL1Q9UNK9 670 aaKnown RBP24.31■■□□□ 1.48
TSPAN3-210ENST00000561277 AOC2O75106 756 aa24.3■■□□□ 1.48
TSPAN3-210ENST00000561277 ARMC9Q7Z3E5 817 aa24.3■■□□□ 1.48
TSPAN3-210ENST00000561277 FAM163AQ96GL9 167 aaPredicted RBP24.3■■□□□ 1.48
TSPAN3-210ENST00000561277 TEPSINQ96N21 525 aa24.3■■□□□ 1.48
TSPAN3-210ENST00000561277 MYO5AQ9Y4I1 1855 aaKnown RBP24.3■■□□□ 1.48
TSPAN3-210ENST00000561277 TCP10Q12799 353 aa24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 NFIAQ12857 509 aa24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 FKBP1CQ5VVH2 108 aa24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 FAM83AQ86UY5 434 aa24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 ANTXR1Q9H6X2 564 aa24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 PPP1R12BO60237 982 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 IDH1O75874 414 aaKnown RBP24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 LDHCP07864 332 aa24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 IRX6P78412 446 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 NAA16Q6N069 864 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 DNAJC2Q99543 621 aaKnown RBP24.29■■□□□ 1.48
TSPAN3-210ENST00000561277 THSD7BQ9C0I4 1608 aa24.28■■□□□ 1.48
TSPAN3-210ENST00000561277 AAMPQ13685 434 aa24.28■■□□□ 1.48
TSPAN3-210ENST00000561277 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-210ENST00000561277 GPR75-ASB3A0A0A6YYF3 556 aa24.27■■□□□ 1.48
TSPAN3-210ENST00000561277 FAM151AQ8WW52 585 aa24.26■■□□□ 1.47
TSPAN3-210ENST00000561277 CCDC102AQ96A19 550 aa24.26■■□□□ 1.47
TSPAN3-210ENST00000561277 BOLA2Q9H3K6 86 aa24.26■■□□□ 1.47
TSPAN3-210ENST00000561277 FAM198AQ9UFP1 575 aa24.26■■□□□ 1.47
TSPAN3-210ENST00000561277 FAM155AB1AL88 458 aaPredicted RBP24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 HSPA1AP0DMV8 641 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 HSPA1BP0DMV9 641 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 HDAC1Q13547 482 aaPredicted RBP24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 RASAL3Q86YV0 1011 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 DOCK2Q92608 1830 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 GOLIM4O00461 696 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 SLC10A3P09131 477 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 RGS3P49796 1198 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 NOGQ13253 232 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 PICALMQ13492 652 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 ADGRA1Q86SQ6 560 aa24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 NOL10Q9BSC4 688 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-210ENST00000561277 RFX7Q2KHR2 1363 aa24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 RPAP1Q9BWH6 1393 aaPredicted RBP24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 ATP5JP18859 108 aa24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 RHBDL3P58872 404 aa24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 ZIC5Q96T25 663 aa24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 IDI2Q9BXS1 227 aa24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 AATFQ9NY61 560 aaKnown RBP eCLIP24.24■■□□□ 1.47
TSPAN3-210ENST00000561277 USP2O75604 605 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 WDHD1O75717 1129 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 MAP2K2P36507 400 aa24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 IREB2P48200 963 aaKnown RBP24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 MAP3K12Q12852 859 aa24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 TTF1Q15361 905 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 MAP3K11Q16584 847 aa24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 LDLRAD1Q5T700 205 aa24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 ZFPM1Q8IX07 1006 aa24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 MAGEB6Q8N7X4 407 aa24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 DDX4Q9NQI0 724 aaKnown RBP24.23■■□□□ 1.47
TSPAN3-210ENST00000561277 CYP7A1P22680 504 aa24.22■■□□□ 1.47
TSPAN3-210ENST00000561277 TSHZ3Q63HK5 1081 aa24.22■■□□□ 1.47
TSPAN3-210ENST00000561277 ECHDC1Q9NTX5 307 aa24.22■■□□□ 1.47
TSPAN3-210ENST00000561277 AK9Q5TCS8 1911 aa24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 MAP2K1Q02750 393 aaPredicted RBP24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 ZSCAN29Q8IWY8 852 aaPredicted RBP24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 SH3RF3Q8TEJ3 882 aaPredicted RBP24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 GPATCH3Q96I76 525 aa24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 CLMNQ96JQ2 1002 aa24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 PAG1Q9NWQ8 432 aa24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 ZBTB47Q9UFB7 747 aaPredicted RBP24.21■■□□□ 1.47
TSPAN3-210ENST00000561277 IGSF3O75054 1194 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 BAG3O95817 575 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 MKRN3Q13064 507 aaKnown RBP24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 ANKRD45Q5TZF3 282 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 TEX11Q8IYF3 940 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 GCC1Q96CN9 775 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 HOOK2Q96ED9 719 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 HAUS7Q99871 368 aa24.2■■□□□ 1.47
TSPAN3-210ENST00000561277 OTOFQ9HC10 1997 aa24.2■■□□□ 1.46
TSPAN3-210ENST00000561277 ENTPD3O75355 529 aa24.2■■□□□ 1.46
TSPAN3-210ENST00000561277 MIGA2Q7L4E1 593 aa24.2■■□□□ 1.46
TSPAN3-210ENST00000561277 AIDAQ96BJ3 306 aa24.2■■□□□ 1.46
TSPAN3-210ENST00000561277 RWDD1Q9H446 243 aaPredicted RBP24.2■■□□□ 1.46
TSPAN3-210ENST00000561277 WBP1LQ9NX94 342 aa24.2■■□□□ 1.46
TSPAN3-210ENST00000561277 KIF23Q02241 960 aaPredicted RBP24.19■■□□□ 1.46
TSPAN3-210ENST00000561277 ANKRD13AQ8IZ07 590 aa24.19■■□□□ 1.46
TSPAN3-210ENST00000561277 MIGA1Q8NAN2 632 aa24.19■■□□□ 1.46
TSPAN3-210ENST00000561277 DYNLL1P63167 89 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms