RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 C17orf99Q6UX52 265 aa25.6■■□□□ 1.69
PSEN1-225ENST00000560005 PUS3Q9BZE2 481 aaKnown RBP25.6■■□□□ 1.69
PSEN1-225ENST00000560005 SRRDQ9UH36 339 aa25.6■■□□□ 1.69
PSEN1-225ENST00000560005 VAMP4O75379 141 aa25.59■■□□□ 1.69
PSEN1-225ENST00000560005 BCAR3O75815 825 aa25.59■■□□□ 1.69
PSEN1-225ENST00000560005 PSMC4P43686 418 aa25.59■■□□□ 1.69
PSEN1-225ENST00000560005 TEKT1Q969V4 418 aa25.59■■□□□ 1.69
PSEN1-225ENST00000560005 TRIM47Q96LD4 638 aa25.59■■□□□ 1.69
PSEN1-225ENST00000560005 IPO8O15397 1037 aaKnown RBP25.58■■□□□ 1.69
PSEN1-225ENST00000560005 HDLBPQ00341 1268 aaKnown RBP25.58■■□□□ 1.69
PSEN1-225ENST00000560005 VPS37DQ86XT2 251 aa25.58■■□□□ 1.69
PSEN1-225ENST00000560005 RAET1EQ8TD07 263 aa25.58■■□□□ 1.69
PSEN1-225ENST00000560005 TMOD2Q9NZR1 351 aa25.58■■□□□ 1.69
PSEN1-225ENST00000560005 OSBPP22059 807 aa25.57■■□□□ 1.68
PSEN1-225ENST00000560005 FAM83AQ86UY5 434 aa25.57■■□□□ 1.68
PSEN1-225ENST00000560005 NKX2-3Q8TAU0 364 aa25.57■■□□□ 1.68
PSEN1-225ENST00000560005 HOOK2Q96ED9 719 aa25.57■■□□□ 1.68
PSEN1-225ENST00000560005 SMC4Q9NTJ3 1288 aa25.57■■□□□ 1.68
PSEN1-225ENST00000560005 GRK4P32298 578 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 GJA8P48165 433 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 FBXO33Q7Z6M2 555 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 UBE2Q1Q7Z7E8 422 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 TBC1D22AQ8WUA7 517 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 C9orf78Q9NZ63 289 aaPredicted RBP25.56■■□□□ 1.68
PSEN1-225ENST00000560005 RIPOR2Q9Y4F9 1068 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 KIF16BQ96L93 1317 aa25.56■■□□□ 1.68
PSEN1-225ENST00000560005 FRAT2O75474 233 aaPredicted RBP25.55■■□□□ 1.68
PSEN1-225ENST00000560005 FMNL1O95466 1100 aaPredicted RBP25.55■■□□□ 1.68
PSEN1-225ENST00000560005 CCL5P13501 91 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 HOXD10P28358 340 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 PPATQ06203 517 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 DCAF15Q66K64 600 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 MIGA2Q7L4E1 593 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 ZDHHC15Q96MV8 337 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 HTATIP2Q9BUP3 242 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 MYPNQ86TC9 1320 aa25.55■■□□□ 1.68
PSEN1-225ENST00000560005 LAMA3Q16787 3333 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 PDHXO00330 501 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 GJB1P08034 283 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 INPP5BP32019 993 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 ANKRD23Q86SG2 305 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 SSH1Q8WYL5 1049 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 ZNF341Q9BYN7 854 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 MROH5Q6ZUA9 1318 aa25.54■■□□□ 1.68
PSEN1-225ENST00000560005 FKBP1CQ5VVH2 108 aa25.53■■□□□ 1.68
PSEN1-225ENST00000560005 ZKSCAN2Q63HK3 967 aa25.53■■□□□ 1.68
PSEN1-225ENST00000560005 APOBEC3HQ6NTF7 200 aaKnown RBP25.53■■□□□ 1.68
PSEN1-225ENST00000560005 RNF208Q9H0X6 261 aa25.53■■□□□ 1.68
PSEN1-225ENST00000560005 PRO3102Q9H379 93 aa25.53■■□□□ 1.68
PSEN1-225ENST00000560005 BIN2Q9UBW5 565 aaPredicted RBP25.53■■□□□ 1.68
PSEN1-225ENST00000560005 ADGRA2Q96PE1 1338 aa25.53■■□□□ 1.68
PSEN1-225ENST00000560005 COL6A3P12111 3177 aa25.53■■□□□ 1.68
PSEN1-225ENST00000560005 A0A0C4DFX4 3053 aa25.52■■□□□ 1.68
PSEN1-225ENST00000560005 CAVIN4Q5BKX8 364 aa25.52■■□□□ 1.68
PSEN1-225ENST00000560005 SUCLG2Q96I99 432 aa25.52■■□□□ 1.68
PSEN1-225ENST00000560005 RPAP1Q9BWH6 1393 aaPredicted RBP25.52■■□□□ 1.68
PSEN1-225ENST00000560005 AAMPQ13685 434 aa25.51■■□□□ 1.67
PSEN1-225ENST00000560005 FRAT1Q92837 279 aaPredicted RBP25.51■■□□□ 1.67
PSEN1-225ENST00000560005 KAZALD1Q96I82 304 aa25.51■■□□□ 1.67
PSEN1-225ENST00000560005 NR2E3Q9Y5X4 410 aa25.51■■□□□ 1.67
PSEN1-225ENST00000560005 DLL1O00548 723 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 PRKCZQ05513 592 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 SLC4A10Q6U841 1118 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 SLC17A8Q8NDX2 589 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 ARHGAP45Q92619 1136 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 MRIQ9BWK5 157 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 KCNH4Q9UQ05 1017 aa25.5■■□□□ 1.67
PSEN1-225ENST00000560005 MAST3O60307 1309 aa25.49■■□□□ 1.67
PSEN1-225ENST00000560005 ALDH1L1O75891 902 aa25.49■■□□□ 1.67
PSEN1-225ENST00000560005 UBXN2AP68543 259 aa25.49■■□□□ 1.67
PSEN1-225ENST00000560005 METTL24Q5JXM2 366 aa25.49■■□□□ 1.67
PSEN1-225ENST00000560005 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
PSEN1-225ENST00000560005 FARP2O94887 1054 aaPredicted RBP25.48■■□□□ 1.67
PSEN1-225ENST00000560005 BCAMP50895 628 aa25.48■■□□□ 1.67
PSEN1-225ENST00000560005 MOGSQ13724 837 aa25.48■■□□□ 1.67
PSEN1-225ENST00000560005 LRRC24Q50LG9 513 aa25.48■■□□□ 1.67
PSEN1-225ENST00000560005 U2AF1L4Q8WU68 220 aaKnown RBP25.48■■□□□ 1.67
PSEN1-225ENST00000560005 SRCIN1Q9C0H9 1055 aa25.48■■□□□ 1.67
PSEN1-225ENST00000560005 FCGRTP55899 365 aa25.47■■□□□ 1.67
PSEN1-225ENST00000560005 HHIPL2Q6UWX4 724 aa25.47■■□□□ 1.67
PSEN1-225ENST00000560005 PARK7Q99497 189 aaKnown RBP25.47■■□□□ 1.67
PSEN1-225ENST00000560005 NBPF7P0C2Y1 421 aaPredicted RBP25.46■■□□□ 1.67
PSEN1-225ENST00000560005 SLAIN1Q8ND83 568 aa25.46■■□□□ 1.67
PSEN1-225ENST00000560005 FAM151AQ8WW52 585 aa25.46■■□□□ 1.67
PSEN1-225ENST00000560005 UNC93B1Q9H1C4 597 aa25.46■■□□□ 1.67
PSEN1-225ENST00000560005 ZNF112Q9UJU3 913 aa25.46■■□□□ 1.67
PSEN1-225ENST00000560005 SUGT1Q9Y2Z0 365 aa25.46■■□□□ 1.67
PSEN1-225ENST00000560005 PDE8BO95263 885 aa25.45■■□□□ 1.66
PSEN1-225ENST00000560005 CYP2C8P10632 490 aa25.45■■□□□ 1.66
PSEN1-225ENST00000560005 BCRP11274 1271 aa25.45■■□□□ 1.66
PSEN1-225ENST00000560005 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.66
PSEN1-225ENST00000560005 MRPL50Q8N5N7 158 aaKnown RBP25.45■■□□□ 1.66
PSEN1-225ENST00000560005 VGLL2Q8N8G2 317 aa25.45■■□□□ 1.66
PSEN1-225ENST00000560005 GABRQQ9UN88 632 aa25.45■■□□□ 1.66
PSEN1-225ENST00000560005 TCP10Q12799 353 aa25.44■■□□□ 1.66
PSEN1-225ENST00000560005 FTSJ3Q8IY81 847 aaKnown RBP25.44■■□□□ 1.66
PSEN1-225ENST00000560005 EXOC6Q8TAG9 804 aa25.44■■□□□ 1.66
PSEN1-225ENST00000560005 CRBNQ96SW2 442 aa25.44■■□□□ 1.66
PSEN1-225ENST00000560005 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
PSEN1-225ENST00000560005 SGPL1O95470 568 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms