RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
SEMA4B-214ENST00000560003 CCDC8Q9H0W5 538 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-214ENST00000560003 RAI14Q9P0K7 980 aa11.03□□□□□ -0.64
SEMA4B-214ENST00000560003 COL1A1P02452 1464 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-214ENST00000560003 BAG3O95817 575 aa11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 PRDX5P30044 214 aa11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 CERS3Q8IU89 383 aa11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 DCTPP1Q9H773 170 aa11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
SEMA4B-214ENST00000560003 TCP10L2B9ZVM9 353 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 APBB1O00213 710 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 CA12O43570 354 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 PLCG2P16885 1265 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 GRM1Q13255 1194 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 GRIK5Q16478 980 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 CYP4F22Q6NT55 531 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 GPATCH3Q96I76 525 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 IL1RAPL2Q9NP60 686 aa11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 DBNLQ9UJU6 430 aaKnown RBP11.01□□□□□ -0.65
SEMA4B-214ENST00000560003 MCAMP43121 646 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 MECOMQ03112 1051 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 MAP3K12Q12852 859 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 DCAF15Q66K64 600 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
SEMA4B-214ENST00000560003 CDC42EP5Q6NZY7 148 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 DLK2Q6UY11 383 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
SEMA4B-214ENST00000560003 FAM151AQ8WW52 585 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 ANGEL1Q9UNK9 670 aaKnown RBP11□□□□□ -0.65
SEMA4B-214ENST00000560003 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 PCDHAC2Q9Y5I4 1007 aa11□□□□□ -0.65
SEMA4B-214ENST00000560003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11□□□□□ -0.65
SEMA4B-214ENST00000560003 GPR75-ASB3A0A0A6YYF3 556 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 UBE2Q2LH0YL09 131 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 ENTPD3O75355 529 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 INHBEP58166 350 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 LDLRAD1Q5T700 205 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 NBPF12Q5TAG4 269 aaPredicted RBP10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 TBC1D9Q6ZT07 1266 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 NSUN4Q96CB9 384 aaKnown RBP10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 CRBNQ96SW2 442 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 RWDD1Q9H446 243 aaPredicted RBP10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 SNRKQ9NRH2 765 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 SCAF8Q9UPN6 1271 aaKnown RBP10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 PSME4Q14997 1843 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 GAKO14976 1311 aa10.99□□□□□ -0.65
SEMA4B-214ENST00000560003 CYP2E1P05181 493 aaPredicted RBP10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 ATP5JP18859 108 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 ZAP70P43403 619 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 GCC1Q96CN9 775 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 WBP1LQ9NX94 342 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 MROH7-TTC4A0A0A0MT08 1334 aa10.98□□□□□ -0.65
SEMA4B-214ENST00000560003 USP2O75604 605 aaPredicted RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 SLC10A3P09131 477 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 HSPA1AP0DMV8 641 aaKnown RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 HSPA1BP0DMV9 641 aaKnown RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 BTDP43251 543 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 CTCFP49711 727 aaPredicted RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 PPP4CP60510 307 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 HDAC1Q13547 482 aaPredicted RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 PRKG1Q13976 671 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 TLR7Q9NYK1 1049 aaKnown RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 PCDHB15Q9Y5E8 787 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 CSADQ9Y600 493 aa10.97□□□□□ -0.65
SEMA4B-214ENST00000560003 A0A1B0GUL6 1792 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 AOC2O75106 756 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 CYP7A1P22680 504 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 CACNB3P54284 484 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 SREBF2Q12772 1141 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 TCP10Q12799 353 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 ZSCAN25Q6NSZ9 544 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 PI16Q6UXB8 463 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 TEPSINQ96N21 525 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 ZNF341Q9BYN7 854 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
SEMA4B-214ENST00000560003 AOX1Q06278 1338 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 MANSC4A6NHS7 340 aaPredicted RBP10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 FAM155AB1AL88 458 aaPredicted RBP10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 ERC2O15083 957 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 ZBTB48P10074 688 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms