RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PHKA1P46020 1223 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 IREB2P48200 963 aaKnown RBP6.92□□□□□ -1.3
SMAD3-209ENST00000558894 TIMM10P62072 90 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 NFIAQ12857 509 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 TNFAIP1Q13829 316 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 CDC42EP5Q6NZY7 148 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 ATF7IPQ6VMQ6 1270 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 VPS37DQ86XT2 251 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 ZFPM1Q8IX07 1006 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 WDR66Q8TBY9 1149 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 BRI3BPQ8WY22 251 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 OPTNQ96CV9 577 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 ELP3Q9H9T3 547 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 FOXD4L1Q9NU39 408 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 FAM198AQ9UFP1 575 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 HPS5Q9UPZ3 1129 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 DAGLAQ9Y4D2 1042 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 SNCAIPQ9Y6H5 919 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 PDS5AQ29RF7 1337 aaKnown RBP6.92□□□□□ -1.3
SMAD3-209ENST00000558894 PDE4DIPQ5VU43 2346 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 LOC285556D6RIA3 1793 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 DLL1O00548 723 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 SEMA3EO15041 775 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 SRGAP3O43295 1099 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 FKTNO75072 461 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 TNNI2P48788 182 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 MAP3K9P80192 1104 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 TFCP2Q12800 502 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 CRHR2Q13324 411 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 MOGSQ13724 837 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 RASGRF1Q13972 1273 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 FAM151AQ8WW52 585 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 ZKSCAN4Q969J2 545 aaPredicted RBP6.91□□□□□ -1.3
SMAD3-209ENST00000558894 CEP126Q9P2H0 1117 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 ZNF112Q9UJU3 913 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 GAKO14976 1311 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 MAST3O60307 1309 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 MKI67P46013 3256 aaKnown RBP6.91□□□□□ -1.3
SMAD3-209ENST00000558894 SZT2Q5T011 3432 aa6.91□□□□□ -1.3
SMAD3-209ENST00000558894 A0A1B0GUL7 405 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
SMAD3-209ENST00000558894 GNAI3P08754 354 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 SLURP2P0DP57 97 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 RLBP1P12271 317 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 SOX10P56693 466 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 MAP3K10Q02779 954 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 POLA2Q14181 598 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 PKN2Q16513 984 aaKnown RBP6.9□□□□□ -1.3
SMAD3-209ENST00000558894 FAM43AQ8N2R8 423 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 TMEM57Q8N5G2 664 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 FAM163AQ96GL9 167 aaPredicted RBP6.9□□□□□ -1.3
SMAD3-209ENST00000558894 XAGE2Q96GT9 111 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
SMAD3-209ENST00000558894 PHF20L1A8MW92 1017 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 IRF6O14896 467 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 ZBTB7BO15156 539 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-209ENST00000558894 WDHD1O75717 1129 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-209ENST00000558894 INPP5BP32019 993 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-209ENST00000558894 PI16Q6UXB8 463 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 MIGA2Q7L4E1 593 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 OTOP1Q7RTM1 612 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 SSH3Q8TE77 659 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 FRAT1Q92837 279 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-209ENST00000558894 CLUAP1Q96AJ1 413 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 OTUD5Q96G74 571 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 IDI2Q9BXS1 227 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 HMG20BQ9P0W2 317 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-209ENST00000558894 ADGRA2Q96PE1 1338 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 DDX60LQ5H9U9 1706 aaKnown RBP6.89□□□□□ -1.31
SMAD3-209ENST00000558894 MYH1P12882 1939 aa6.89□□□□□ -1.31
SMAD3-209ENST00000558894 PLXNB2O15031 1838 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 COL2A1P02458 1487 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-209ENST00000558894 GPR75-ASB3A0A0A6YYF3 556 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 CCL15-CCL14A0A0B4J2E2 113 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 DDTLA6NHG4 134 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-209ENST00000558894 BTBD19C9JJ37 291 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 IPO8O15397 1037 aaKnown RBP6.88□□□□□ -1.31
SMAD3-209ENST00000558894 GNAI2P04899 355 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 LDHBP07195 334 aaKnown RBP6.88□□□□□ -1.31
SMAD3-209ENST00000558894 CTGFP29279 349 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-209ENST00000558894 GTF2A2P52657 109 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 RHBDL3P58872 404 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 ATP8B2P98198 1209 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 MECOMQ03112 1051 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 PPATQ06203 517 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 TCP10Q12799 353 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 PPIL2Q13356 520 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 CCL15Q16663 113 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 NOL9Q5SY16 702 aaKnown RBP6.88□□□□□ -1.31
SMAD3-209ENST00000558894 ZKSCAN2Q63HK3 967 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 TBC1D9Q6ZT07 1266 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 ERO1BQ86YB8 467 aa6.88□□□□□ -1.31
SMAD3-209ENST00000558894 CD99L2Q8TCZ2 262 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms