RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 BCAR3O75815 825 aa12.57□□□□□ -0.4
USP3-207ENST00000558218 BCAMP50895 628 aa12.57□□□□□ -0.4
USP3-207ENST00000558218 RBM5P52756 815 aaKnown RBP eCLIP12.57□□□□□ -0.4
USP3-207ENST00000558218 KIF23Q02241 960 aaPredicted RBP12.57□□□□□ -0.4
USP3-207ENST00000558218 LDLRAD1Q5T700 205 aa12.57□□□□□ -0.4
USP3-207ENST00000558218 MEIS3Q99687 375 aa12.57□□□□□ -0.4
USP3-207ENST00000558218 MAST3O60307 1309 aa12.57□□□□□ -0.4
USP3-207ENST00000558218 ZBED9Q6R2W3 1325 aa12.57□□□□□ -0.4
USP3-207ENST00000558218 ECM29Q5VYK3 1845 aa12.56□□□□□ -0.4
USP3-207ENST00000558218 GNAI2P04899 355 aa12.56□□□□□ -0.4
USP3-207ENST00000558218 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
USP3-207ENST00000558218 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
USP3-207ENST00000558218 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
USP3-207ENST00000558218 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
USP3-207ENST00000558218 CSRNP1Q96S65 589 aa12.56□□□□□ -0.4
USP3-207ENST00000558218 AKAP2Q9Y2D5 859 aa12.56□□□□□ -0.4
USP3-207ENST00000558218 UBE2Q2LH0YL09 131 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 SRGAP3O43295 1099 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 CRKP46108 304 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 TNNI2P48788 182 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 FKBP1CQ5VVH2 108 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 HHIPL2Q6UWX4 724 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 ZDHHC15Q96MV8 337 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 ZIC5Q96T25 663 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
USP3-207ENST00000558218 JAG2Q9Y219 1238 aa12.55□□□□□ -0.4
USP3-207ENST00000558218 TM4SF4P48230 202 aa12.54□□□□□ -0.4
USP3-207ENST00000558218 INHBEP58166 350 aa12.54□□□□□ -0.4
USP3-207ENST00000558218 RASA3Q14644 834 aa12.54□□□□□ -0.4
USP3-207ENST00000558218 SIL1Q9H173 461 aa12.54□□□□□ -0.4
USP3-207ENST00000558218 DENND2AQ9ULE3 1009 aa12.54□□□□□ -0.4
USP3-207ENST00000558218 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
USP3-207ENST00000558218 AKAP11Q9UKA4 1901 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 CLRN2A0PK11 232 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 CHAF1AQ13111 956 aaPredicted RBP12.53□□□□□ -0.4
USP3-207ENST00000558218 MOB2Q70IA6 237 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 ZGPATQ8N5A5 531 aaKnown RBP12.53□□□□□ -0.4
USP3-207ENST00000558218 SLC10A4Q96EP9 437 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
USP3-207ENST00000558218 VEZTQ9HBM0 779 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
USP3-207ENST00000558218 IQSEC3Q9UPP2 1182 aaPredicted RBP12.53□□□□□ -0.4
USP3-207ENST00000558218 PCDHAC2Q9Y5I4 1007 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 PDS5AQ29RF7 1337 aaKnown RBP12.53□□□□□ -0.4
USP3-207ENST00000558218 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
USP3-207ENST00000558218 MS4A1P11836 297 aa12.52□□□□□ -0.41
USP3-207ENST00000558218 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
USP3-207ENST00000558218 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
USP3-207ENST00000558218 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
USP3-207ENST00000558218 FAM83AQ86UY5 434 aa12.52□□□□□ -0.41
USP3-207ENST00000558218 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
USP3-207ENST00000558218 HOOK2Q96ED9 719 aa12.52□□□□□ -0.41
USP3-207ENST00000558218 PA2G4Q9UQ80 394 aaKnown RBP12.52□□□□□ -0.41
USP3-207ENST00000558218 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
USP3-207ENST00000558218 GTPBP6O43824 516 aaPredicted RBP12.51□□□□□ -0.41
USP3-207ENST00000558218 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
USP3-207ENST00000558218 ZBTB48P10074 688 aaPredicted RBP12.51□□□□□ -0.41
USP3-207ENST00000558218 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP3-207ENST00000558218 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
USP3-207ENST00000558218 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
USP3-207ENST00000558218 APOBEC3HQ6NTF7 200 aaKnown RBP12.51□□□□□ -0.41
USP3-207ENST00000558218 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
USP3-207ENST00000558218 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
USP3-207ENST00000558218 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
USP3-207ENST00000558218 C2orf72A6NCS6 295 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 MANSC4A6NHS7 340 aaPredicted RBP12.5□□□□□ -0.41
USP3-207ENST00000558218 ZBTB7BO15156 539 aaPredicted RBP12.5□□□□□ -0.41
USP3-207ENST00000558218 TRPA1O75762 1119 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 TIMM10P62072 90 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 ATP8B2P98198 1209 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 MVPQ14764 893 aaKnown RBP12.5□□□□□ -0.41
USP3-207ENST00000558218 GRIK5Q16478 980 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 CCDC102BQ68D86 513 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 FTSJ3Q8IY81 847 aaKnown RBP12.5□□□□□ -0.41
USP3-207ENST00000558218 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 CFHR5Q9BXR6 569 aa12.5□□□□□ -0.41
USP3-207ENST00000558218 AOX1Q06278 1338 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 A0A1B0GUL7 405 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 SNPHO15079 494 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 IGSF3O75054 1194 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
USP3-207ENST00000558218 TFCP2Q12800 502 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 PRKG1Q13976 671 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 SPTY2D1Q68D10 685 aaPredicted RBP12.49□□□□□ -0.41
USP3-207ENST00000558218 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
USP3-207ENST00000558218 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
USP3-207ENST00000558218 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
USP3-207ENST00000558218 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
USP3-207ENST00000558218 PHKA1P46020 1223 aa12.48□□□□□ -0.41
USP3-207ENST00000558218 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms