RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 GMPSP49915 693 aaPredicted RBP11.09□□□□□ -0.63
CHD8-214ENST00000557727 GTF2IP78347 998 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 CAVIN4Q5BKX8 364 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
CHD8-214ENST00000557727 PI16Q6UXB8 463 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 AACSQ86V21 672 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 ZNF512BQ96KM6 892 aaPredicted RBP11.09□□□□□ -0.63
CHD8-214ENST00000557727 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 JAG2Q9Y219 1238 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 EGFRP00533 1210 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 FKBP1AP62942 108 aaKnown RBP11.08□□□□□ -0.64
CHD8-214ENST00000557727 TNIP1Q15025 636 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 TTLL5Q6EMB2 1281 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 OTUD7AQ8TE49 926 aaPredicted RBP11.08□□□□□ -0.64
CHD8-214ENST00000557727 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 RWDD1Q9H446 243 aaPredicted RBP11.08□□□□□ -0.64
CHD8-214ENST00000557727 GPRC5DQ9NZD1 345 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 GJA3Q9Y6H8 435 aa11.08□□□□□ -0.64
CHD8-214ENST00000557727 SEMA3EO15041 775 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 EPS15P42566 896 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 ZNF280AP59817 542 aaPredicted RBP11.07□□□□□ -0.64
CHD8-214ENST00000557727 C16orf71Q8IYS4 520 aaPredicted RBP11.07□□□□□ -0.64
CHD8-214ENST00000557727 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
CHD8-214ENST00000557727 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 ZNF526Q8TF50 670 aaPredicted RBP11.07□□□□□ -0.64
CHD8-214ENST00000557727 ZNF384Q8TF68 577 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 DPF2Q92785 391 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 AK9Q5TCS8 1911 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 SALL1Q9NSC2 1324 aa11.07□□□□□ -0.64
CHD8-214ENST00000557727 RPS12P25398 132 aaKnown RBP11.06□□□□□ -0.64
CHD8-214ENST00000557727 NUCB1Q02818 461 aa11.06□□□□□ -0.64
CHD8-214ENST00000557727 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
CHD8-214ENST00000557727 VPS37DQ86XT2 251 aa11.06□□□□□ -0.64
CHD8-214ENST00000557727 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
CHD8-214ENST00000557727 TAF1DQ9H5J8 278 aaPredicted RBP11.06□□□□□ -0.64
CHD8-214ENST00000557727 RRAGCQ9HB90 399 aa11.06□□□□□ -0.64
CHD8-214ENST00000557727 AOX1Q06278 1338 aa11.06□□□□□ -0.64
CHD8-214ENST00000557727 CYP2E1P05181 493 aaPredicted RBP11.05□□□□□ -0.64
CHD8-214ENST00000557727 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
CHD8-214ENST00000557727 CHAF1AQ13111 956 aaPredicted RBP11.05□□□□□ -0.64
CHD8-214ENST00000557727 SPATA5Q8NB90 893 aa11.05□□□□□ -0.64
CHD8-214ENST00000557727 TRPM4Q8TD43 1214 aa11.05□□□□□ -0.64
CHD8-214ENST00000557727 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
CHD8-214ENST00000557727 CNOT7Q9UIV1 285 aaKnown RBP11.05□□□□□ -0.64
CHD8-214ENST00000557727 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
CHD8-214ENST00000557727 PCDHAC2Q9Y5I4 1007 aa11.05□□□□□ -0.64
CHD8-214ENST00000557727 NDUFB9Q9Y6M9 179 aa11.05□□□□□ -0.64
CHD8-214ENST00000557727 MYO3BQ8WXR4 1341 aa11.05□□□□□ -0.64
CHD8-214ENST00000557727 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 VEGFAP15692 232 aaPredicted RBP11.04□□□□□ -0.64
CHD8-214ENST00000557727 ATP5JP18859 108 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 PRDX5P30044 214 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 EPHX2P34913 555 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 PTPN5P54829 565 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 ANKRD45Q5TZF3 282 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHD8-214ENST00000557727 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
CHD8-214ENST00000557727 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 GNL3LQ9NVN8 582 aaKnown RBP11.04□□□□□ -0.64
CHD8-214ENST00000557727 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
CHD8-214ENST00000557727 IFIT2P09913 472 aaKnown RBP11.03□□□□□ -0.64
CHD8-214ENST00000557727 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 ZAP70P43403 619 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 TTC39AQ5SRH9 613 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 B4GALNT3Q6L9W6 998 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 TBC1D9Q6ZT07 1266 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 SAMD7Q7Z3H4 446 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 WDR66Q8TBY9 1149 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 TBC1D22AQ8WUA7 517 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 ANTXR1Q9H6X2 564 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 PIH1D3Q9NQM4 214 aaKnown RBP11.03□□□□□ -0.64
CHD8-214ENST00000557727 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 TRPM7Q96QT4 1865 aa11.03□□□□□ -0.64
CHD8-214ENST00000557727 ASTN2O75129 1339 aaPredicted RBP11.03□□□□□ -0.64
CHD8-214ENST00000557727 IQCA1LA6NCM1 817 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 GOLGA8CPA6NN73 597 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 GORABQ5T7V8 394 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 MTMR14Q8NCE2 650 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 EDC3Q96F86 508 aaKnown RBP11.02□□□□□ -0.65
CHD8-214ENST00000557727 NBPF3Q9H094 633 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 MYOZ2Q9NPC6 264 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
CHD8-214ENST00000557727 ECHDC1Q9NTX5 307 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 PGAP2Q9UHJ9 254 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms