RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 BTBD19C9JJ37 291 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 TLR2O60603 784 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 SNAPC2Q13487 334 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 ARHGEF6Q15052 776 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 DIXDC1Q155Q3 683 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 ATP2B3Q16720 1220 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 CDC42EP5Q6NZY7 148 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 SIL1Q9H173 461 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 CEP126Q9P2H0 1117 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 ZNF112Q9UJU3 913 aa19.9■□□□□ 0.78
SCFD1-224ENST00000557713 CT47B1P0C2W7 299 aaPredicted RBP19.89■□□□□ 0.77
SCFD1-224ENST00000557713 PRDX5P30044 214 aa19.89■□□□□ 0.77
SCFD1-224ENST00000557713 INPP5BP32019 993 aa19.89■□□□□ 0.77
SCFD1-224ENST00000557713 PPATQ06203 517 aa19.89■□□□□ 0.77
SCFD1-224ENST00000557713 GNL3LQ9NVN8 582 aaKnown RBP19.89■□□□□ 0.77
SCFD1-224ENST00000557713 RBBP6Q7Z6E9 1792 aaKnown RBP19.88■□□□□ 0.77
SCFD1-224ENST00000557713 SALL1Q9NSC2 1324 aa19.88■□□□□ 0.77
SCFD1-224ENST00000557713 ZBTB22O15209 634 aa19.88■□□□□ 0.77
SCFD1-224ENST00000557713 WDHD1O75717 1129 aaPredicted RBP19.88■□□□□ 0.77
SCFD1-224ENST00000557713 IL15P40933 162 aaPredicted RBP19.88■□□□□ 0.77
SCFD1-224ENST00000557713 NFIAQ12857 509 aa19.88■□□□□ 0.77
SCFD1-224ENST00000557713 ZNF333Q96JL9 665 aa19.88■□□□□ 0.77
SCFD1-224ENST00000557713 PCDH10Q9P2E7 1040 aa19.88■□□□□ 0.77
SCFD1-224ENST00000557713 PTCH2Q9Y6C5 1203 aa19.88■□□□□ 0.77
SCFD1-224ENST00000557713 SEMA3EO15041 775 aa19.87■□□□□ 0.77
SCFD1-224ENST00000557713 LDHBP07195 334 aaKnown RBP19.87■□□□□ 0.77
SCFD1-224ENST00000557713 EN2P19622 333 aaPredicted RBP19.87■□□□□ 0.77
SCFD1-224ENST00000557713 TCP10Q12799 353 aa19.87■□□□□ 0.77
SCFD1-224ENST00000557713 API5Q9BZZ5 524 aaKnown RBP19.87■□□□□ 0.77
SCFD1-224ENST00000557713 COPRSQ9NQ92 184 aa19.87■□□□□ 0.77
SCFD1-224ENST00000557713 FAM198AQ9UFP1 575 aa19.87■□□□□ 0.77
SCFD1-224ENST00000557713 DENND2AQ9ULE3 1009 aa19.87■□□□□ 0.77
SCFD1-224ENST00000557713 LRRFIP2Q9Y608 721 aaKnown RBP19.87■□□□□ 0.77
SCFD1-224ENST00000557713 MYH13Q9UKX3 1938 aa19.86■□□□□ 0.77
SCFD1-224ENST00000557713 CENPFP49454 3210 aa19.86■□□□□ 0.77
SCFD1-224ENST00000557713 PHKA1P46020 1223 aa19.86■□□□□ 0.77
SCFD1-224ENST00000557713 USP40Q9NVE5 1235 aa19.86■□□□□ 0.77
SCFD1-224ENST00000557713 PA2G4Q9UQ80 394 aaKnown RBP19.86■□□□□ 0.77
SCFD1-224ENST00000557713 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
SCFD1-224ENST00000557713 LACTBP83111 547 aaPredicted RBP19.85■□□□□ 0.77
SCFD1-224ENST00000557713 C17orf99Q6UX52 265 aa19.85■□□□□ 0.77
SCFD1-224ENST00000557713 NBPF11Q86T75 865 aa19.85■□□□□ 0.77
SCFD1-224ENST00000557713 ZFPM1Q8IX07 1006 aa19.85■□□□□ 0.77
SCFD1-224ENST00000557713 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.85■□□□□ 0.77
SCFD1-224ENST00000557713 ARHGAP39Q9C0H5 1083 aa19.85■□□□□ 0.77
SCFD1-224ENST00000557713 KCNH4Q9UQ05 1017 aa19.85■□□□□ 0.77
SCFD1-224ENST00000557713 SLC9C1Q4G0N8 1177 aa19.84■□□□□ 0.77
SCFD1-224ENST00000557713 NOL9Q5SY16 702 aaKnown RBP19.84■□□□□ 0.77
SCFD1-224ENST00000557713 CCDC102BQ68D86 513 aa19.84■□□□□ 0.77
SCFD1-224ENST00000557713 ANKRD23Q86SG2 305 aa19.84■□□□□ 0.77
SCFD1-224ENST00000557713 MEIS3Q99687 375 aa19.84■□□□□ 0.77
SCFD1-224ENST00000557713 TMEM106CQ9BVX2 250 aa19.84■□□□□ 0.77
SCFD1-224ENST00000557713 GNRH1P01148 92 aa19.83■□□□□ 0.77
SCFD1-224ENST00000557713 ADORA1P30542 326 aa19.83■□□□□ 0.77
SCFD1-224ENST00000557713 MOGSQ13724 837 aa19.83■□□□□ 0.77
SCFD1-224ENST00000557713 KIF22Q14807 665 aa19.83■□□□□ 0.77
SCFD1-224ENST00000557713 RARSP54136 660 aaKnown RBP19.82■□□□□ 0.76
SCFD1-224ENST00000557713 TIMM10P62072 90 aa19.82■□□□□ 0.76
SCFD1-224ENST00000557713 IDI2Q9BXS1 227 aa19.82■□□□□ 0.76
SCFD1-224ENST00000557713 ZSWIM8A7E2V4 1837 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 GAKO14976 1311 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 MKI67P46013 3256 aaKnown RBP19.81■□□□□ 0.76
SCFD1-224ENST00000557713 PDHXO00330 501 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 ENTPD3O75355 529 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 CTGFP29279 349 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 PRMT2P55345 433 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 ZGPATQ8N5A5 531 aaKnown RBP19.81■□□□□ 0.76
SCFD1-224ENST00000557713 ARHGAP45Q92619 1136 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 GCC1Q96CN9 775 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 CPA4Q9UI42 421 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 ATRNL1Q5VV63 1379 aa19.81■□□□□ 0.76
SCFD1-224ENST00000557713 BRCA2P51587 3418 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 PDS5AQ29RF7 1337 aaKnown RBP19.8■□□□□ 0.76
SCFD1-224ENST00000557713 ADGRA2Q96PE1 1338 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 PHF20L1A8MW92 1017 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 RGS3P49796 1198 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 MAP3K10Q02779 954 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 SH3TC2Q8TF17 1288 aa19.8■□□□□ 0.76
SCFD1-224ENST00000557713 FAM163AQ96GL9 167 aaPredicted RBP19.8■□□□□ 0.76
SCFD1-224ENST00000557713 CXCL11O14625 94 aa19.79■□□□□ 0.76
SCFD1-224ENST00000557713 MTX1Q13505 466 aa19.79■□□□□ 0.76
SCFD1-224ENST00000557713 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
SCFD1-224ENST00000557713 KIAA0100Q14667 2235 aaKnown RBP19.78■□□□□ 0.76
SCFD1-224ENST00000557713 GNAI3P08754 354 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 TFCP2Q12800 502 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 SLC4A8Q2Y0W8 1093 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 GPAT2Q6NUI2 795 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 XAGE2Q96GT9 111 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 TRIM47Q96LD4 638 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 RFX7Q2KHR2 1363 aa19.78■□□□□ 0.76
SCFD1-224ENST00000557713 AK9Q5TCS8 1911 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 A0A1B0GUL7 405 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 SRGAP3O43295 1099 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 PSMC4P43686 418 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 SLF2Q8IX21 1173 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 SRRDQ9UH36 339 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 AKAP2Q9Y2D5 859 aa19.77■□□□□ 0.76
SCFD1-224ENST00000557713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms