RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PTPRCP08575 1304 aa17.66■□□□□ 0.42
SLIRP-210ENST00000557431 MYO5AQ9Y4I1 1855 aaKnown RBP17.65■□□□□ 0.42
SLIRP-210ENST00000557431 EYA2O00167 538 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 PRDX5P30044 214 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 NFIAQ12857 509 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 HABP4Q5JVS0 413 aaKnown RBP17.65■□□□□ 0.42
SLIRP-210ENST00000557431 ATG9AQ7Z3C6 839 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 FAM83AQ86UY5 434 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 CPA4Q9UI42 421 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 DAGLAQ9Y4D2 1042 aa17.65■□□□□ 0.42
SLIRP-210ENST00000557431 RPAP1Q9BWH6 1393 aaPredicted RBP17.65■□□□□ 0.42
SLIRP-210ENST00000557431 TLR2O60603 784 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 SLURP2P0DP57 97 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 CETPP11597 493 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 SLC5A1P13866 664 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 PPIL2Q13356 520 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 SNAPC2Q13487 334 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 SLC4A8Q2Y0W8 1093 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 ZNF341Q9BYN7 854 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 CEP290O15078 2479 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 MAST3O60307 1309 aa17.64■□□□□ 0.41
SLIRP-210ENST00000557431 LACTBP83111 547 aaPredicted RBP17.63■□□□□ 0.41
SLIRP-210ENST00000557431 HHIPL2Q6UWX4 724 aa17.63■□□□□ 0.41
SLIRP-210ENST00000557431 ZFPM1Q8IX07 1006 aa17.63■□□□□ 0.41
SLIRP-210ENST00000557431 PA2G4Q9UQ80 394 aaKnown RBP17.63■□□□□ 0.41
SLIRP-210ENST00000557431 CDK5RAP2Q96SN8 1893 aa17.63■□□□□ 0.41
SLIRP-210ENST00000557431 MTFR1Q15390 333 aa17.62■□□□□ 0.41
SLIRP-210ENST00000557431 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
SLIRP-210ENST00000557431 LPIN2Q92539 896 aa17.62■□□□□ 0.41
SLIRP-210ENST00000557431 ALPK3Q96L96 1907 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 ADORA1P30542 326 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 PHKA1P46020 1223 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 ATP2B3Q16720 1220 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 FKBP1CQ5VVH2 108 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 WDR66Q8TBY9 1149 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 FAM151AQ8WW52 585 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 GCC1Q96CN9 775 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 MRIQ9BWK5 157 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 FAM198AQ9UFP1 575 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 SUGT1Q9Y2Z0 365 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
SLIRP-210ENST00000557431 E9PSI1 815 aa17.6■□□□□ 0.41
SLIRP-210ENST00000557431 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
SLIRP-210ENST00000557431 KIF22Q14807 665 aa17.6■□□□□ 0.41
SLIRP-210ENST00000557431 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
SLIRP-210ENST00000557431 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
SLIRP-210ENST00000557431 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
SLIRP-210ENST00000557431 ADGRA2Q96PE1 1338 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 PDHXO00330 501 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 PPATQ06203 517 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 MOGSQ13724 837 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 ARHGEF6Q15052 776 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 USP40Q9NVE5 1235 aa17.59■□□□□ 0.41
SLIRP-210ENST00000557431 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.59■□□□□ 0.41
SLIRP-210ENST00000557431 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
SLIRP-210ENST00000557431 WDHD1O75717 1129 aaPredicted RBP17.58■□□□□ 0.4
SLIRP-210ENST00000557431 LDHBP07195 334 aaKnown RBP17.58■□□□□ 0.4
SLIRP-210ENST00000557431 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
SLIRP-210ENST00000557431 OSBPP22059 807 aa17.58■□□□□ 0.4
SLIRP-210ENST00000557431 PSMC4P43686 418 aa17.58■□□□□ 0.4
SLIRP-210ENST00000557431 SHISA4Q96DD7 197 aa17.58■□□□□ 0.4
SLIRP-210ENST00000557431 HOOK2Q96ED9 719 aa17.58■□□□□ 0.4
SLIRP-210ENST00000557431 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
SLIRP-210ENST00000557431 SIPA1L1O43166 1804 aa17.57■□□□□ 0.4
SLIRP-210ENST00000557431 CYP2C8P10632 490 aa17.57■□□□□ 0.4
SLIRP-210ENST00000557431 ANKRD23Q86SG2 305 aa17.57■□□□□ 0.4
SLIRP-210ENST00000557431 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
SLIRP-210ENST00000557431 ZCCHC17Q9NP64 241 aaKnown RBP17.57■□□□□ 0.4
SLIRP-210ENST00000557431 CEP126Q9P2H0 1117 aa17.57■□□□□ 0.4
SLIRP-210ENST00000557431 KCNH4Q9UQ05 1017 aa17.57■□□□□ 0.4
SLIRP-210ENST00000557431 COLQQ9Y215 455 aaPredicted RBP17.57■□□□□ 0.4
SLIRP-210ENST00000557431 ATRNL1Q5VV63 1379 aa17.56■□□□□ 0.4
SLIRP-210ENST00000557431 RGS3P49796 1198 aa17.56■□□□□ 0.4
SLIRP-210ENST00000557431 FXR1P51114 621 aaKnown RBP eCLIP17.56■□□□□ 0.4
SLIRP-210ENST00000557431 SH3BP5LQ7L8J4 393 aa17.56■□□□□ 0.4
SLIRP-210ENST00000557431 MEIS3Q99687 375 aa17.56■□□□□ 0.4
SLIRP-210ENST00000557431 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
SLIRP-210ENST00000557431 NOB1Q9ULX3 412 aaKnown RBP17.56■□□□□ 0.4
SLIRP-210ENST00000557431 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
SLIRP-210ENST00000557431 MYPNQ86TC9 1320 aa17.55■□□□□ 0.4
SLIRP-210ENST00000557431 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
SLIRP-210ENST00000557431 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
SLIRP-210ENST00000557431 NOL9Q5SY16 702 aaKnown RBP17.55■□□□□ 0.4
SLIRP-210ENST00000557431 GPAT2Q6NUI2 795 aa17.55■□□□□ 0.4
SLIRP-210ENST00000557431 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
SLIRP-210ENST00000557431 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 H0YGN5 161 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 PICALMQ13492 652 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 GADL1Q6ZQY3 521 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 DDX4Q9NQI0 724 aaKnown RBP17.54■□□□□ 0.4
SLIRP-210ENST00000557431 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
SLIRP-210ENST00000557431 GABRQQ9UN88 632 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms