RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 ZNF341Q9BYN7 854 aa21.38■■□□□ 1.01
NEDD1-210ENST00000557400 CENPFP49454 3210 aa21.37■■□□□ 1.01
NEDD1-210ENST00000557400 LACTBP83111 547 aaPredicted RBP21.36■■□□□ 1.01
NEDD1-210ENST00000557400 PPATQ06203 517 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 KIF22Q14807 665 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 ALDH1L2Q3SY69 923 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 MIGA2Q7L4E1 593 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 ATG9AQ7Z3C6 839 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 FAM151AQ8WW52 585 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 DAGLAQ9Y4D2 1042 aa21.36■■□□□ 1.01
NEDD1-210ENST00000557400 INPP5BP32019 993 aa21.35■■□□□ 1.01
NEDD1-210ENST00000557400 SMC4Q9NTJ3 1288 aa21.35■■□□□ 1.01
NEDD1-210ENST00000557400 FBXO3Q9UK99 471 aa21.35■■□□□ 1.01
NEDD1-210ENST00000557400 PRDX5P30044 214 aa21.34■■□□□ 1.01
NEDD1-210ENST00000557400 DIXDC1Q155Q3 683 aa21.34■■□□□ 1.01
NEDD1-210ENST00000557400 CDC42EP5Q6NZY7 148 aa21.34■■□□□ 1.01
NEDD1-210ENST00000557400 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.34■■□□□ 1.01
NEDD1-210ENST00000557400 ARHGAP39Q9C0H5 1083 aa21.34■■□□□ 1.01
NEDD1-210ENST00000557400 CIAO1O76071 339 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 GNRH1P01148 92 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
NEDD1-210ENST00000557400 TCP10Q12799 353 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 ATP2B3Q16720 1220 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 SLC4A8Q2Y0W8 1093 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 SIL1Q9H173 461 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 GNL3LQ9NVN8 582 aaKnown RBP21.33■■□□□ 1.01
NEDD1-210ENST00000557400 CEP126Q9P2H0 1117 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 ZNF112Q9UJU3 913 aa21.33■■□□□ 1.01
NEDD1-210ENST00000557400 RBBP6Q7Z6E9 1792 aaKnown RBP21.33■■□□□ 1
NEDD1-210ENST00000557400 LDHBP07195 334 aaKnown RBP21.32■■□□□ 1
NEDD1-210ENST00000557400 NFIAQ12857 509 aa21.32■■□□□ 1
NEDD1-210ENST00000557400 HABP4Q5JVS0 413 aaKnown RBP21.32■■□□□ 1
NEDD1-210ENST00000557400 ANKRD23Q86SG2 305 aa21.32■■□□□ 1
NEDD1-210ENST00000557400 BRCA2P51587 3418 aa21.32■■□□□ 1
NEDD1-210ENST00000557400 PRMT2P55345 433 aa21.31■■□□□ 1
NEDD1-210ENST00000557400 C17orf99Q6UX52 265 aa21.31■■□□□ 1
NEDD1-210ENST00000557400 SH3TC2Q8TF17 1288 aa21.31■■□□□ 1
NEDD1-210ENST00000557400 KCNH4Q9UQ05 1017 aa21.31■■□□□ 1
NEDD1-210ENST00000557400 SALL1Q9NSC2 1324 aa21.3■■□□□ 1
NEDD1-210ENST00000557400 SEMA3EO15041 775 aa21.3■■□□□ 1
NEDD1-210ENST00000557400 NOL9Q5SY16 702 aaKnown RBP21.3■■□□□ 1
NEDD1-210ENST00000557400 FAM198AQ9UFP1 575 aa21.3■■□□□ 1
NEDD1-210ENST00000557400 DENND2AQ9ULE3 1009 aa21.3■■□□□ 1
NEDD1-210ENST00000557400 PDHXO00330 501 aa21.29■■□□□ 1
NEDD1-210ENST00000557400 MYCP01106 439 aaPredicted RBP21.29■■□□□ 1
NEDD1-210ENST00000557400 IL15P40933 162 aaPredicted RBP21.29■■□□□ 1
NEDD1-210ENST00000557400 PHKA1P46020 1223 aa21.29■■□□□ 1
NEDD1-210ENST00000557400 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
NEDD1-210ENST00000557400 USP40Q9NVE5 1235 aa21.29■■□□□ 1
NEDD1-210ENST00000557400 CPA4Q9UI42 421 aa21.29■■□□□ 1
NEDD1-210ENST00000557400 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
NEDD1-210ENST00000557400 KIAA0100Q14667 2235 aaKnown RBP21.29■■□□□ 1
NEDD1-210ENST00000557400 ZBTB22O15209 634 aa21.27■■□□□ 1
NEDD1-210ENST00000557400 CT47B1P0C2W7 299 aaPredicted RBP21.27■■□□□ 1
NEDD1-210ENST00000557400 PSMC4P43686 418 aa21.27■■□□□ 1
NEDD1-210ENST00000557400 MOGSQ13724 837 aa21.27■■□□□ 1
NEDD1-210ENST00000557400 TRIM47Q96LD4 638 aa21.27■■□□□ 1
NEDD1-210ENST00000557400 SRRDQ9UH36 339 aa21.27■■□□□ 1
NEDD1-210ENST00000557400 LRRFIP2Q9Y608 721 aaKnown RBP21.27■■□□□ 1
NEDD1-210ENST00000557400 ADGRA2Q96PE1 1338 aa21.27■□□□□ 0.99
NEDD1-210ENST00000557400 ECM2O94769 699 aaPredicted RBP21.26■□□□□ 0.99
NEDD1-210ENST00000557400 ZFPM1Q8IX07 1006 aa21.26■□□□□ 0.99
NEDD1-210ENST00000557400 TRMT2AQ8IZ69 625 aaKnown RBP21.26■□□□□ 0.99
NEDD1-210ENST00000557400 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
NEDD1-210ENST00000557400 API5Q9BZZ5 524 aaKnown RBP21.26■□□□□ 0.99
NEDD1-210ENST00000557400 NOB1Q9ULX3 412 aaKnown RBP21.26■□□□□ 0.99
NEDD1-210ENST00000557400 PA2G4Q9UQ80 394 aaKnown RBP21.26■□□□□ 0.99
NEDD1-210ENST00000557400 ATRNL1Q5VV63 1379 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 CXCL11O14625 94 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 HOXD10P28358 340 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 CTGFP29279 349 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 CCDC102BQ68D86 513 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 PARK7Q99497 189 aaKnown RBP21.25■□□□□ 0.99
NEDD1-210ENST00000557400 IDI2Q9BXS1 227 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 GAKO14976 1311 aa21.25■□□□□ 0.99
NEDD1-210ENST00000557400 ENTPD3O75355 529 aa21.24■□□□□ 0.99
NEDD1-210ENST00000557400 FMNL1O95466 1100 aaPredicted RBP21.24■□□□□ 0.99
NEDD1-210ENST00000557400 OSBPP22059 807 aa21.24■□□□□ 0.99
NEDD1-210ENST00000557400 ADORA1P30542 326 aa21.24■□□□□ 0.99
NEDD1-210ENST00000557400 RGS3P49796 1198 aa21.24■□□□□ 0.99
NEDD1-210ENST00000557400 RASGRF1Q13972 1273 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 GPAT2Q6NUI2 795 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 DZIP1Q86YF9 867 aaKnown RBP21.23■□□□□ 0.99
NEDD1-210ENST00000557400 SCYL3Q8IZE3 742 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 RAET1EQ8TD07 263 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 MEIS3Q99687 375 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 PICK1Q9NRD5 415 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 RFX7Q2KHR2 1363 aa21.23■□□□□ 0.99
NEDD1-210ENST00000557400 PHF20L1A8MW92 1017 aa21.22■□□□□ 0.99
NEDD1-210ENST00000557400 MTFR1Q15390 333 aa21.22■□□□□ 0.99
NEDD1-210ENST00000557400 SLF2Q8IX21 1173 aa21.22■□□□□ 0.99
NEDD1-210ENST00000557400 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
NEDD1-210ENST00000557400 ZSWIM8A7E2V4 1837 aa21.22■□□□□ 0.99
NEDD1-210ENST00000557400 BCRP11274 1271 aa21.21■□□□□ 0.99
NEDD1-210ENST00000557400 GRK4P32298 578 aa21.21■□□□□ 0.99
NEDD1-210ENST00000557400 FASTKD5Q7L8L6 764 aaKnown RBP21.21■□□□□ 0.99
NEDD1-210ENST00000557400 ZSCAN29Q8IWY8 852 aaPredicted RBP21.21■□□□□ 0.99
NEDD1-210ENST00000557400 FAM163AQ96GL9 167 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms