RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 GPR108Q9NPR9 543 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 NOP58Q9Y2X3 529 aaKnown RBP14.66□□□□□ -0.06
SYNE2-226ENST00000557084 DAGLAQ9Y4D2 1042 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 PDS5AQ29RF7 1337 aaKnown RBP14.66□□□□□ -0.06
SYNE2-226ENST00000557084 PDE3AQ14432 1141 aa14.65□□□□□ -0.06
SYNE2-226ENST00000557084 LDLRAD1Q5T700 205 aa14.65□□□□□ -0.06
SYNE2-226ENST00000557084 IFFO2Q5TF58 517 aa14.65□□□□□ -0.06
SYNE2-226ENST00000557084 FKBP1CQ5VVH2 108 aa14.65□□□□□ -0.06
SYNE2-226ENST00000557084 ERICH6Q7L0X2 663 aa14.65□□□□□ -0.06
SYNE2-226ENST00000557084 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
SYNE2-226ENST00000557084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
SYNE2-226ENST00000557084 TRPA1O75762 1119 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 GSTO1P78417 241 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 FAM83AQ86UY5 434 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 RPAP2Q8IXW5 612 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-226ENST00000557084 CSRNP1Q96S65 589 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 RAI14Q9P0K7 980 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 HMG20BQ9P0W2 317 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 EXOC6BQ9Y2D4 811 aa14.64□□□□□ -0.07
SYNE2-226ENST00000557084 ARAP2Q8WZ64 1704 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 UNCXA6NJT0 531 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 USP2O75604 605 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-226ENST00000557084 ARID4AP29374 1257 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-226ENST00000557084 SREBF2Q12772 1141 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 MAP3K11Q16584 847 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 CDC42EP5Q6NZY7 148 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 ANKRD13AQ8IZ07 590 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 DBNDD2Q9BQY9 259 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 LRP2BPQ9P2M1 347 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 THSD7BQ9C0I4 1608 aa14.63□□□□□ -0.07
SYNE2-226ENST00000557084 MYH13Q9UKX3 1938 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 APBB1O00213 710 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 LDHCP07864 332 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 TCP10Q12799 353 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 SPRYD7Q5W111 196 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 PI16Q6UXB8 463 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 CLMNQ96JQ2 1002 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 TEPSINQ96N21 525 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 CCDC8Q9H0W5 538 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-226ENST00000557084 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 RNF186Q9NXI6 227 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 SAGE1Q9NXZ1 904 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 CSADQ9Y600 493 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 ECM29Q5VYK3 1845 aa14.62□□□□□ -0.07
SYNE2-226ENST00000557084 MCAMP43121 646 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 MECOMQ03112 1051 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 C20orf194Q5TEA3 1177 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 TBC1D9Q6ZT07 1266 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 AACSQ86V21 672 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 FAM151AQ8WW52 585 aa14.61□□□□□ -0.07
SYNE2-226ENST00000557084 NOL10Q9BSC4 688 aaKnown RBP14.61□□□□□ -0.07
SYNE2-226ENST00000557084 SSC5DA1L4H1 1573 aa14.6□□□□□ -0.07
SYNE2-226ENST00000557084 ZBTB48P10074 688 aaPredicted RBP14.6□□□□□ -0.07
SYNE2-226ENST00000557084 BTDP43251 543 aa14.6□□□□□ -0.07
SYNE2-226ENST00000557084 MAP3K9P80192 1104 aa14.6□□□□□ -0.07
SYNE2-226ENST00000557084 ZSCAN29Q8IWY8 852 aaPredicted RBP14.6□□□□□ -0.07
SYNE2-226ENST00000557084 ELP3Q9H9T3 547 aa14.6□□□□□ -0.07
SYNE2-226ENST00000557084 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
SYNE2-226ENST00000557084 MANSC4A6NHS7 340 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-226ENST00000557084 INHBEP58166 350 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 CLASRPQ8N2M8 674 aaKnown RBP14.59□□□□□ -0.07
SYNE2-226ENST00000557084 EAF2Q96CJ1 260 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-226ENST00000557084 KIF1BPQ96EK5 621 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 FAM163AQ96GL9 167 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-226ENST00000557084 WNK4Q96J92 1243 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 WRNIP1Q96S55 665 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 MROH7-TTC4A0A0A0MT08 1334 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 GAKO14976 1311 aa14.59□□□□□ -0.07
SYNE2-226ENST00000557084 RAB11FIP3O75154 756 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 IFIT2P09913 472 aaKnown RBP14.58□□□□□ -0.08
SYNE2-226ENST00000557084 TM4SF4P48230 202 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 RGS3P49796 1198 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 NFIAQ12857 509 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 NAA16Q6N069 864 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-226ENST00000557084 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 RHPN1Q8TCX5 695 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 NSUN4Q96CB9 384 aaKnown RBP14.58□□□□□ -0.08
SYNE2-226ENST00000557084 OPTNQ96CV9 577 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-226ENST00000557084 ZNF341Q9BYN7 854 aa14.58□□□□□ -0.08
SYNE2-226ENST00000557084 TLR7Q9NYK1 1049 aaKnown RBP14.58□□□□□ -0.08
SYNE2-226ENST00000557084 BAG3O95817 575 aa14.57□□□□□ -0.08
SYNE2-226ENST00000557084 ALDH1A1P00352 501 aa14.57□□□□□ -0.08
SYNE2-226ENST00000557084 PICALMQ13492 652 aa14.57□□□□□ -0.08
SYNE2-226ENST00000557084 VGLL4Q14135 290 aa14.57□□□□□ -0.08
SYNE2-226ENST00000557084 OTUD7BQ6GQQ9 843 aa14.57□□□□□ -0.08
SYNE2-226ENST00000557084 FAM198AQ9UFP1 575 aa14.57□□□□□ -0.08
SYNE2-226ENST00000557084 RPAP1Q9BWH6 1393 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-226ENST00000557084 GPR75-ASB3A0A0A6YYF3 556 aa14.56□□□□□ -0.08
SYNE2-226ENST00000557084 ENTPD3O75355 529 aa14.56□□□□□ -0.08
SYNE2-226ENST00000557084 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-226ENST00000557084 ZAP70P43403 619 aa14.56□□□□□ -0.08
SYNE2-226ENST00000557084 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms