RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
CRX-203ENST00000556527 VGLL2Q8N8G2 317 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
CRX-203ENST00000556527 SH3TC2Q8TF17 1288 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 LPIN2Q92539 896 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
CRX-203ENST00000556527 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
CRX-203ENST00000556527 EYA2O00167 538 aa12.22□□□□□ -0.45
CRX-203ENST00000556527 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
CRX-203ENST00000556527 LDHBP07195 334 aaKnown RBP12.22□□□□□ -0.45
CRX-203ENST00000556527 RAET1EQ8TD07 263 aa12.22□□□□□ -0.45
CRX-203ENST00000556527 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
CRX-203ENST00000556527 BIN2Q9UBW5 565 aaPredicted RBP12.22□□□□□ -0.45
CRX-203ENST00000556527 HDAC5Q9UQL6 1122 aa12.22□□□□□ -0.45
CRX-203ENST00000556527 E9PSI1 815 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 PDHXO00330 501 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.45
CRX-203ENST00000556527 PSMC4P43686 418 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 ARHGAP39Q9C0H5 1083 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 USP44Q9H0E7 712 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 SIL1Q9H173 461 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 CPA4Q9UI42 421 aa12.21□□□□□ -0.45
CRX-203ENST00000556527 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
CRX-203ENST00000556527 INPP5BP32019 993 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 CAP1Q01518 475 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
CRX-203ENST00000556527 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 PARK7Q99497 189 aaKnown RBP12.2□□□□□ -0.46
CRX-203ENST00000556527 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 USP40Q9NVE5 1235 aa12.2□□□□□ -0.46
CRX-203ENST00000556527 FGFR2P21802 821 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 DIXDC1Q155Q3 683 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 CDC42EP5Q6NZY7 148 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 SLF2Q8IX21 1173 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 ZGPATQ8N5A5 531 aaKnown RBP12.19□□□□□ -0.46
CRX-203ENST00000556527 DPF3Q92784 378 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 DAGLAQ9Y4D2 1042 aa12.19□□□□□ -0.46
CRX-203ENST00000556527 MYPNQ86TC9 1320 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 CENPFP49454 3210 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 SEMA3EO15041 775 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 PRDX5P30044 214 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 GRK4P32298 578 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 FCGRTP55899 365 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 UBXN2AP68543 259 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 ALDH1L2Q3SY69 923 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 C17orf99Q6UX52 265 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
CRX-203ENST00000556527 SRRDQ9UH36 339 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
CRX-203ENST00000556527 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
CRX-203ENST00000556527 CIAO1O76071 339 aa12.17□□□□□ -0.46
CRX-203ENST00000556527 OSBPP22059 807 aa12.17□□□□□ -0.46
CRX-203ENST00000556527 NFIAQ12857 509 aa12.17□□□□□ -0.46
CRX-203ENST00000556527 FASTKD5Q7L8L6 764 aaKnown RBP12.17□□□□□ -0.46
CRX-203ENST00000556527 HTATIP2Q9BUP3 242 aa12.17□□□□□ -0.46
CRX-203ENST00000556527 ZNF112Q9UJU3 913 aa12.17□□□□□ -0.46
CRX-203ENST00000556527 KCNH4Q9UQ05 1017 aa12.17□□□□□ -0.46
CRX-203ENST00000556527 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
CRX-203ENST00000556527 ZNF521Q96K83 1311 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 H0YGN5 161 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 CXCL11O14625 94 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 IL15P40933 162 aaPredicted RBP12.16□□□□□ -0.46
CRX-203ENST00000556527 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
CRX-203ENST00000556527 NOL9Q5SY16 702 aaKnown RBP12.16□□□□□ -0.46
CRX-203ENST00000556527 SPTY2D1Q68D10 685 aaPredicted RBP12.16□□□□□ -0.46
CRX-203ENST00000556527 GADL1Q6ZQY3 521 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
CRX-203ENST00000556527 RNF208Q9H0X6 261 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 ABCF2Q9UG63 623 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
CRX-203ENST00000556527 KIAA0100Q14667 2235 aaKnown RBP12.16□□□□□ -0.46
CRX-203ENST00000556527 SALL1Q9NSC2 1324 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 CYP2C8P10632 490 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 CCL5P13501 91 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 RGS3P49796 1198 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
CRX-203ENST00000556527 MTFR1Q15390 333 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 SCYL3Q8IZE3 742 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 FAM198AQ9UFP1 575 aa12.15□□□□□ -0.46
CRX-203ENST00000556527 MKI67P46013 3256 aaKnown RBP12.15□□□□□ -0.46
CRX-203ENST00000556527 ENTPD3O75355 529 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 PHKA1P46020 1223 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 PRKCZQ05513 592 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 PICALMQ13492 652 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
CRX-203ENST00000556527 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 AKAP2Q9Y2D5 859 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 NR2E3Q9Y5X4 410 aa12.14□□□□□ -0.47
CRX-203ENST00000556527 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms