RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TEPSINQ96N21 525 aa14.14□□□□□ -0.15
SLIRP-206ENST00000556375 CCDC8Q9H0W5 538 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-206ENST00000556375 MROH7-TTC4A0A0A0MT08 1334 aa14.14□□□□□ -0.15
SLIRP-206ENST00000556375 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
SLIRP-206ENST00000556375 RAB11FIP3O75154 756 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 PRKG1Q13976 671 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 AACSQ86V21 672 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 TMEM39BQ9GZU3 492 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 ANGEL1Q9UNK9 670 aaKnown RBP14.13□□□□□ -0.15
SLIRP-206ENST00000556375 AK9Q5TCS8 1911 aa14.13□□□□□ -0.15
SLIRP-206ENST00000556375 FOXN1O15353 648 aa14.12□□□□□ -0.15
SLIRP-206ENST00000556375 MECOMQ03112 1051 aa14.12□□□□□ -0.15
SLIRP-206ENST00000556375 LDLRAD1Q5T700 205 aa14.12□□□□□ -0.15
SLIRP-206ENST00000556375 CDC42EP5Q6NZY7 148 aa14.12□□□□□ -0.15
SLIRP-206ENST00000556375 CDAN1Q8IWY9 1227 aa14.12□□□□□ -0.15
SLIRP-206ENST00000556375 CLASRPQ8N2M8 674 aaKnown RBP14.12□□□□□ -0.15
SLIRP-206ENST00000556375 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
SLIRP-206ENST00000556375 UNCXA6NJT0 531 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 APBB1O00213 710 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 IGSF3O75054 1194 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 IREB2P48200 963 aaKnown RBP14.11□□□□□ -0.15
SLIRP-206ENST00000556375 GSTO1P78417 241 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 ZNF384Q8TF68 577 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 NSUN4Q96CB9 384 aaKnown RBP14.11□□□□□ -0.15
SLIRP-206ENST00000556375 CDK5RAP2Q96SN8 1893 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 ZIC5Q96T25 663 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 BEGAINQ9BUH8 593 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 SNRKQ9NRH2 765 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 RAI14Q9P0K7 980 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 FZD1Q9UP38 647 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 FOCADQ5VW36 1801 aa14.11□□□□□ -0.15
SLIRP-206ENST00000556375 CA12O43570 354 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 CYP2E1P05181 493 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-206ENST00000556375 BTDP43251 543 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 ZAP70P43403 619 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 CTCFP49711 727 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-206ENST00000556375 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 HOOK2Q96ED9 719 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 USP40Q9NVE5 1235 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 LRP2BPQ9P2M1 347 aa14.1□□□□□ -0.15
SLIRP-206ENST00000556375 GPR75-ASB3A0A0A6YYF3 556 aa14.09□□□□□ -0.15
SLIRP-206ENST00000556375 LDHCP07864 332 aa14.09□□□□□ -0.15
SLIRP-206ENST00000556375 IFIT2P09913 472 aaKnown RBP14.09□□□□□ -0.15
SLIRP-206ENST00000556375 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
SLIRP-206ENST00000556375 NFIAQ12857 509 aa14.09□□□□□ -0.15
SLIRP-206ENST00000556375 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
SLIRP-206ENST00000556375 IDI2Q9BXS1 227 aa14.09□□□□□ -0.15
SLIRP-206ENST00000556375 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
SLIRP-206ENST00000556375 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-206ENST00000556375 MAP4K4O95819 1239 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-206ENST00000556375 HSPA8P11142 646 aaKnown RBP14.08□□□□□ -0.16
SLIRP-206ENST00000556375 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
SLIRP-206ENST00000556375 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
SLIRP-206ENST00000556375 LRRCC1Q9C099 1032 aa14.08□□□□□ -0.16
SLIRP-206ENST00000556375 MYH7P12883 1935 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-206ENST00000556375 ENTPD3O75355 529 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 WDHD1O75717 1129 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-206ENST00000556375 RGS3P49796 1198 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 RHBDL3P58872 404 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 TCP10Q12799 353 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 SPRYD7Q5W111 196 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 DCAF15Q66K64 600 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 NAA16Q6N069 864 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-206ENST00000556375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.07□□□□□ -0.161e-8■■■■■ 34
SLIRP-206ENST00000556375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLIRP-206ENST00000556375 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 DCTPP1Q9H773 170 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 PIH1D3Q9NQM4 214 aaKnown RBP14.07□□□□□ -0.16
SLIRP-206ENST00000556375 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
SLIRP-206ENST00000556375 ZBTB48P10074 688 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-206ENST00000556375 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-206ENST00000556375 SLC10A4Q96EP9 437 aa14.06□□□□□ -0.16
SLIRP-206ENST00000556375 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
SLIRP-206ENST00000556375 CSRNP1Q96S65 589 aa14.06□□□□□ -0.16
SLIRP-206ENST00000556375 NOL10Q9BSC4 688 aaKnown RBP14.06□□□□□ -0.16
SLIRP-206ENST00000556375 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
SLIRP-206ENST00000556375 ATRNL1Q5VV63 1379 aa14.06□□□□□ -0.16
SLIRP-206ENST00000556375 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
SLIRP-206ENST00000556375 IDH1O75874 414 aaKnown RBP14.05□□□□□ -0.16
SLIRP-206ENST00000556375 LBX1P52954 281 aa14.05□□□□□ -0.16
SLIRP-206ENST00000556375 SREBF2Q12772 1141 aa14.05□□□□□ -0.16
SLIRP-206ENST00000556375 VGLL4Q14135 290 aa14.05□□□□□ -0.16
SLIRP-206ENST00000556375 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-206ENST00000556375 DDX4Q9NQI0 724 aaKnown RBP14.05□□□□□ -0.16
SLIRP-206ENST00000556375 CSADQ9Y600 493 aa14.05□□□□□ -0.16
SLIRP-206ENST00000556375 NDUFB9Q9Y6M9 179 aa14.05□□□□□ -0.16
SLIRP-206ENST00000556375 DOCK1Q14185 1865 aa14.04□□□□□ -0.16
SLIRP-206ENST00000556375 BAG3O95817 575 aa14.04□□□□□ -0.16
SLIRP-206ENST00000556375 PLCG2P16885 1265 aa14.04□□□□□ -0.16
SLIRP-206ENST00000556375 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
SLIRP-206ENST00000556375 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
SLIRP-206ENST00000556375 PICALMQ13492 652 aa14.04□□□□□ -0.16
SLIRP-206ENST00000556375 AAMPQ13685 434 aa14.04□□□□□ -0.16
SLIRP-206ENST00000556375 TTF1Q15361 905 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-206ENST00000556375 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms