RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TAOK1Q7L7X3 1001 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TNPO1Q92973 898 aaKnown RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 SMIM24O75264 130 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 LONRF3Q496Y0 759 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 CAPN2P17655 700 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 METTL13Q8N6R0 699 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 NEK1Q96PY6 1258 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 RABEP2Q9H5N1 569 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 NIP7Q9Y221 180 aaKnown RBP eCLIP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 RTL1A6NKG5 1358 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TNFAIP3P21580 790 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 MRPL46Q9H2W6 279 aaKnown RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TBC1D7Q9P0N9 293 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 ATAD2Q6PL18 1390 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 FGD6Q6ZV73 1430 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 SLC4A1P02730 911 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TNNC1P63316 161 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 FOXD4Q12950 439 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 Q6ZUG5 572 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 CHST3Q7LGC8 479 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TSGA10Q9BZW7 698 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 POLA1P09884 1462 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 CAMSAP2Q08AD1 1489 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 BMP15O95972 392 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 HCLS1P14317 486 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 ATP5DP30049 168 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 FAM76AQ8TAV0 307 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 MGARPQ8TDB4 240 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 SFMBT1Q9UHJ3 866 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TRAF5O00463 557 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 GSTA1P08263 222 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 GSTA2P09210 222 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 PDE6AP16499 860 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 KRT81Q14533 505 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 RYBPQ8N488 228 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 CNNM2Q9H8M5 875 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 EPRSP07814 1512 aaKnown RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 PLCG2P16885 1265 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 VAV2P52735 878 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 EIF6P56537 245 aaKnown RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 HHATQ5VTY9 493 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 SESTD1Q86VW0 696 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 SUPT6HQ7KZ85 1726 aaKnown RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 TRIM75PA6NK02 468 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 GABPB2Q8TAK5 448 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-216ENST00000555002 HMG20BQ9P0W2 317 aa7.69□□□□□ -1.18
SYNE2-216ENST00000555002 UQCRFS1P1P0C7P4 283 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 DCUN1D2Q6PH85 259 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 CDAN1Q8IWY9 1227 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 CPSF2Q9P2I0 782 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 DBF4Q9UBU7 674 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 SUFUQ9UMX1 484 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 RPAP2Q8IXW5 612 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 UBL4BQ8N7F7 174 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 CXorf38Q8TB03 319 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 S100BP04271 92 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 SAT1P21673 171 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 CLNS1AP54105 237 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 IL1RL1Q01638 556 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 CARD10Q9BWT7 1032 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 HNRNPCL2B2RXH8 293 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 EBAG9O00559 213 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 HNRNPCL1O60812 293 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 SYNJ2BP-COX16A0A087WUM0 186 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 COG7P83436 770 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 MUM1L1Q5H9M0 696 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 MRPS27Q92552 414 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 COX16Q9P0S2 106 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 BACH2Q9BYV9 841 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 PHF8Q9UPP1 1060 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 FNDC3AQ9Y2H6 1198 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 AMOTL2Q9Y2J4 779 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 LDHBP07195 334 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 BRF1Q92994 677 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 NOX5Q96PH1 765 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 LRPPRCP42704 1394 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 KRT83P78385 493 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 SPAG1Q07617 926 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 JADE1Q6IE81 842 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 KCNG4Q8TDN1 519 aa7.68□□□□□ -1.18
SYNE2-216ENST00000555002 NUCKS1Q9H1E3 243 aaKnown RBP7.68□□□□□ -1.18
SYNE2-216ENST00000555002 KRT86O43790 486 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 GANCQ8TET4 914 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 OLA1Q9NTK5 396 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 UTP11Q9Y3A2 253 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 UBE2HP62256 183 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 TSPYL2Q9H2G4 693 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 LUC7L2Q9Y383 392 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 CALML3P27482 149 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 PAXBP1Q9Y5B6 917 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 CD2APQ9Y5K6 639 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 PRPF6O94906 941 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 ASIC2Q16515 512 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 LMNTD2Q8IXW0 634 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 RBM17Q96I25 401 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 ASIC3Q9UHC3 531 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 CD19P15391 556 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms