RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
TMEM253-204ENST00000554844 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
TMEM253-204ENST00000554844 PDE8BO95263 885 aa12.11□□□□□ -0.47
TMEM253-204ENST00000554844 FKBP1CQ5VVH2 108 aa12.11□□□□□ -0.47
TMEM253-204ENST00000554844 RAET1EQ8TD07 263 aa12.11□□□□□ -0.47
TMEM253-204ENST00000554844 SH3TC2Q8TF17 1288 aa12.11□□□□□ -0.47
TMEM253-204ENST00000554844 IRF6O14896 467 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
TMEM253-204ENST00000554844 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
TMEM253-204ENST00000554844 SLC5A1P13866 664 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 PPATQ06203 517 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
TMEM253-204ENST00000554844 LRRC24Q50LG9 513 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 ZKSCAN4Q969J2 545 aaPredicted RBP12.1□□□□□ -0.47
TMEM253-204ENST00000554844 MRIQ9BWK5 157 aa12.1□□□□□ -0.47
TMEM253-204ENST00000554844 BIN2Q9UBW5 565 aaPredicted RBP12.1□□□□□ -0.47
TMEM253-204ENST00000554844 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
TMEM253-204ENST00000554844 BCAMP50895 628 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 HHIPL2Q6UWX4 724 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 ANKRD23Q86SG2 305 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.09□□□□□ -0.47
TMEM253-204ENST00000554844 DPF3Q92784 378 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 ARHGAP39Q9C0H5 1083 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 UTYO14607 1347 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
TMEM253-204ENST00000554844 MYH13Q9UKX3 1938 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 PDHXO00330 501 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 PSMC4P43686 418 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM253-204ENST00000554844 UBXN2AP68543 259 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 CAP1Q01518 475 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 GRIK5Q16478 980 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
TMEM253-204ENST00000554844 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 FAM151AQ8WW52 585 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 PARK7Q99497 189 aaKnown RBP12.08□□□□□ -0.48
TMEM253-204ENST00000554844 HTATIP2Q9BUP3 242 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
TMEM253-204ENST00000554844 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
TMEM253-204ENST00000554844 PTPRCP08575 1304 aa12.08□□□□□ -0.48
TMEM253-204ENST00000554844 GRK4P32298 578 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 CENPFP49454 3210 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
TMEM253-204ENST00000554844 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 LPIN2Q92539 896 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 SRRDQ9UH36 339 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 MYPNQ86TC9 1320 aa12.07□□□□□ -0.48
TMEM253-204ENST00000554844 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
TMEM253-204ENST00000554844 H0YGN5 161 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
TMEM253-204ENST00000554844 INPP5BP32019 993 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 FCGRTP55899 365 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 TCP10Q12799 353 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 ANKRD44Q8N8A2 993 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 PICK1Q9NRD5 415 aa12.06□□□□□ -0.48
TMEM253-204ENST00000554844 CEP290O15078 2479 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 EYA2O00167 538 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 OSBPP22059 807 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 KLHDC4Q8TBB5 520 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 KCNH4Q9UQ05 1017 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 NR2E3Q9Y5X4 410 aa12.05□□□□□ -0.48
TMEM253-204ENST00000554844 ZSWIM8A7E2V4 1837 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 FGFR2P21802 821 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 MTFR1Q15390 333 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 NOL9Q5SY16 702 aaKnown RBP12.04□□□□□ -0.48
TMEM253-204ENST00000554844 CDC42EP5Q6NZY7 148 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 FASTKD5Q7L8L6 764 aaKnown RBP12.04□□□□□ -0.48
TMEM253-204ENST00000554844 ZSCAN29Q8IWY8 852 aaPredicted RBP12.04□□□□□ -0.48
TMEM253-204ENST00000554844 SLF2Q8IX21 1173 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
TMEM253-204ENST00000554844 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 DAGLAQ9Y4D2 1042 aa12.04□□□□□ -0.48
TMEM253-204ENST00000554844 CXCL11O14625 94 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 GJB1P08034 283 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 CCL5P13501 91 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 GJA8P48165 433 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 GADL1Q6ZQY3 521 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
TMEM253-204ENST00000554844 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
TMEM253-204ENST00000554844 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
TMEM253-204ENST00000554844 SEMA3EO15041 775 aa12.02□□□□□ -0.49
TMEM253-204ENST00000554844 PRDX5P30044 214 aa12.02□□□□□ -0.49
TMEM253-204ENST00000554844 PRKCZQ05513 592 aa12.02□□□□□ -0.49
TMEM253-204ENST00000554844 DZIP1Q86YF9 867 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms