RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
PRKCH-208ENST00000553846 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 FBXO33Q7Z6M2 555 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-208ENST00000553846 ZDHHC15Q96MV8 337 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 RNF208Q9H0X6 261 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 PAK6Q9NQU5 681 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-208ENST00000553846 GABRQQ9UN88 632 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 SGPL1O95470 568 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 BMP8BP34820 402 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 TNNI2P48788 182 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 UBE4AQ14139 1066 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 NOL9Q5SY16 702 aaKnown RBP11.58□□□□□ -0.56
PRKCH-208ENST00000553846 BEND3Q5T5X7 828 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 RAET1EQ8TD07 263 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 MRIQ9BWK5 157 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 STAP2Q9UGK3 403 aa11.58□□□□□ -0.56
PRKCH-208ENST00000553846 COL2A1P02458 1487 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-208ENST00000553846 WDHD1O75717 1129 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-208ENST00000553846 HIBADHP31937 336 aaKnown RBP11.57□□□□□ -0.56
PRKCH-208ENST00000553846 TWISTNBQ3B726 338 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-208ENST00000553846 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
PRKCH-208ENST00000553846 VGLL2Q8N8G2 317 aa11.57□□□□□ -0.56
PRKCH-208ENST00000553846 KAZALD1Q96I82 304 aa11.57□□□□□ -0.56
PRKCH-208ENST00000553846 STXBP5LQ9Y2K9 1186 aa11.57□□□□□ -0.56
PRKCH-208ENST00000553846 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-208ENST00000553846 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-208ENST00000553846 HOXD10P28358 340 aa11.56□□□□□ -0.56
PRKCH-208ENST00000553846 LRIT3Q3SXY7 679 aa11.56□□□□□ -0.56
PRKCH-208ENST00000553846 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
PRKCH-208ENST00000553846 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
PRKCH-208ENST00000553846 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
PRKCH-208ENST00000553846 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
PRKCH-208ENST00000553846 EVI5O60447 810 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 INHAP05111 366 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 CYP2C8P10632 490 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 ELNP15502 786 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 CAPN2P17655 700 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 UBXN2AP68543 259 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 IRF5Q13568 498 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 Q7L0L9 218 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 DIS3LQ8TF46 1054 aaKnown RBP11.55□□□□□ -0.56
PRKCH-208ENST00000553846 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
PRKCH-208ENST00000553846 ZNF341Q9BYN7 854 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 MTMR10Q9NXD2 777 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 PLXNB2O15031 1838 aa11.55□□□□□ -0.56
PRKCH-208ENST00000553846 GRM8O00222 908 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 ADCY3O60266 1144 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 FLT3LGP49771 235 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 FCGRTP55899 365 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
PRKCH-208ENST00000553846 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 MIGA2Q7L4E1 593 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 TBC1D22AQ8WUA7 517 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
PRKCH-208ENST00000553846 CNNM1Q9NRU3 951 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 MYH13Q9UKX3 1938 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
PRKCH-208ENST00000553846 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 A0A0G2JLL6 359 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-208ENST00000553846 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 F6X3S4 739 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 PLIN1O60240 522 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 HHIPL2Q6UWX4 724 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 PRRT2Q7Z6L0 340 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-208ENST00000553846 DEFB123Q8N688 67 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 FAM151AQ8WW52 585 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 HOOK2Q96ED9 719 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
PRKCH-208ENST00000553846 DEFB118Q96PH6 123 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-208ENST00000553846 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 IL16Q14005 1332 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
PRKCH-208ENST00000553846 CXCL11O14625 94 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 NFIAQ12857 509 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 WWC1Q8IX03 1113 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 FAM198AQ9UFP1 575 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 SLC45A1Q9Y2W3 748 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 UTYO14607 1347 aa11.52□□□□□ -0.57
PRKCH-208ENST00000553846 VAMP4O75379 141 aa11.51□□□□□ -0.57
PRKCH-208ENST00000553846 FGFR2P21802 821 aa11.51□□□□□ -0.57
PRKCH-208ENST00000553846 BCAMP50895 628 aa11.51□□□□□ -0.57
PRKCH-208ENST00000553846 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
PRKCH-208ENST00000553846 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-208ENST00000553846 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-208ENST00000553846 BIN2Q9UBW5 565 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-208ENST00000553846 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
PRKCH-208ENST00000553846 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms