RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 CTCFP49711 727 aaPredicted RBP17.45■□□□□ 0.38
PRKCH-207ENST00000553831 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
PRKCH-207ENST00000553831 MECOMQ03112 1051 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 MAP3K11Q16584 847 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 CDC42EP5Q6NZY7 148 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 AACSQ86V21 672 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 ZNF384Q8TF68 577 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 BEGAINQ9BUH8 593 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 IL1RAPL2Q9NP60 686 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 MYH2Q9UKX2 1941 aa17.45■□□□□ 0.38
PRKCH-207ENST00000553831 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
PRKCH-207ENST00000553831 COL13A1Q5TAT6 717 aaPredicted RBP17.44■□□□□ 0.38
PRKCH-207ENST00000553831 FAM83AQ86UY5 434 aa17.44■□□□□ 0.38
PRKCH-207ENST00000553831 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
PRKCH-207ENST00000553831 MROH7-TTC4A0A0A0MT08 1334 aa17.44■□□□□ 0.38
PRKCH-207ENST00000553831 RPAP1Q9BWH6 1393 aaPredicted RBP17.43■□□□□ 0.38
PRKCH-207ENST00000553831 AKAP11Q9UKA4 1901 aa17.43■□□□□ 0.38
PRKCH-207ENST00000553831 USP2O75604 605 aaPredicted RBP17.43■□□□□ 0.38
PRKCH-207ENST00000553831 NFIAQ12857 509 aa17.43■□□□□ 0.38
PRKCH-207ENST00000553831 SLF2Q8IX21 1173 aa17.43■□□□□ 0.38
PRKCH-207ENST00000553831 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
PRKCH-207ENST00000553831 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
PRKCH-207ENST00000553831 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
PRKCH-207ENST00000553831 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
PRKCH-207ENST00000553831 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 BTDP43251 543 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 ZAP70P43403 619 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
PRKCH-207ENST00000553831 LBX1P52954 281 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
PRKCH-207ENST00000553831 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
PRKCH-207ENST00000553831 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-207ENST00000553831 FAM198AQ9UFP1 575 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 OTOFQ9HC10 1997 aa17.42■□□□□ 0.38
PRKCH-207ENST00000553831 RFX7Q2KHR2 1363 aa17.41■□□□□ 0.38
PRKCH-207ENST00000553831 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
PRKCH-207ENST00000553831 TCP10Q12799 353 aa17.41■□□□□ 0.38
PRKCH-207ENST00000553831 FAM151AQ8WW52 585 aa17.41■□□□□ 0.38
PRKCH-207ENST00000553831 CSRNP1Q96S65 589 aa17.41■□□□□ 0.38
PRKCH-207ENST00000553831 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
PRKCH-207ENST00000553831 MAST2Q6P0Q8 1798 aa17.4■□□□□ 0.38
PRKCH-207ENST00000553831 CA12O43570 354 aa17.4■□□□□ 0.38
PRKCH-207ENST00000553831 GSTO1P78417 241 aa17.4■□□□□ 0.38
PRKCH-207ENST00000553831 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
PRKCH-207ENST00000553831 BCL11AQ9H165 835 aa17.4■□□□□ 0.38
PRKCH-207ENST00000553831 PIH1D3Q9NQM4 214 aaKnown RBP17.4■□□□□ 0.38
PRKCH-207ENST00000553831 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
PRKCH-207ENST00000553831 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 LDHCP07864 332 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 SPRYD7Q5W111 196 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 ANKRD13AQ8IZ07 590 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 IDI2Q9BXS1 227 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 NDUFB9Q9Y6M9 179 aa17.39■□□□□ 0.37
PRKCH-207ENST00000553831 WDHD1O75717 1129 aaPredicted RBP17.38■□□□□ 0.37
PRKCH-207ENST00000553831 IFIT2P09913 472 aaKnown RBP17.38■□□□□ 0.37
PRKCH-207ENST00000553831 RGS3P49796 1198 aa17.38■□□□□ 0.37
PRKCH-207ENST00000553831 RHBDL3P58872 404 aa17.38■□□□□ 0.37
PRKCH-207ENST00000553831 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
PRKCH-207ENST00000553831 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
PRKCH-207ENST00000553831 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.37
PRKCH-207ENST00000553831 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
PRKCH-207ENST00000553831 CRBNQ96SW2 442 aa17.38■□□□□ 0.37
PRKCH-207ENST00000553831 GJA5P36382 358 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 MAP3K9P80192 1104 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 PICALMQ13492 652 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 VGLL4Q14135 290 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
PRKCH-207ENST00000553831 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
PRKCH-207ENST00000553831 HOOK2Q96ED9 719 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 ELP3Q9H9T3 547 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 DDX4Q9NQI0 724 aaKnown RBP17.37■□□□□ 0.37
PRKCH-207ENST00000553831 RNF186Q9NXI6 227 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
PRKCH-207ENST00000553831 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
PRKCH-207ENST00000553831 ENTPD3O75355 529 aa17.36■□□□□ 0.37
PRKCH-207ENST00000553831 ZBTB48P10074 688 aaPredicted RBP17.36■□□□□ 0.37
PRKCH-207ENST00000553831 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
PRKCH-207ENST00000553831 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
PRKCH-207ENST00000553831 WRNIP1Q96S55 665 aa17.36■□□□□ 0.37
PRKCH-207ENST00000553831 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
PRKCH-207ENST00000553831 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
PRKCH-207ENST00000553831 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
PRKCH-207ENST00000553831 TRPA1O75762 1119 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
PRKCH-207ENST00000553831 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 SH3BP5LQ7L8J4 393 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 ADGRA1Q86SQ6 560 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 CSADQ9Y600 493 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 ATRNL1Q5VV63 1379 aa17.35■□□□□ 0.37
PRKCH-207ENST00000553831 TM4SF4P48230 202 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 AK9Q5TCS8 1911 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 TEX11Q8IYF3 940 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms