RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TRIM47Q96LD4 638 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
SRP54-203ENST00000553544 NR2E3Q9Y5X4 410 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 UTYO14607 1347 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 PTPRCP08575 1304 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 ECM29Q5VYK3 1845 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
SRP54-203ENST00000553544 GJB1P08034 283 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 CT47B1P0C2W7 299 aaPredicted RBP14.83□□□□□ -0.04
SRP54-203ENST00000553544 GJA8P48165 433 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 CHAF1AQ13111 956 aaPredicted RBP14.83□□□□□ -0.04
SRP54-203ENST00000553544 ANKRD23Q86SG2 305 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 MIER1Q8N108 512 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 ZDHHC15Q96MV8 337 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 CPA4Q9UI42 421 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 IQSEC3Q9UPP2 1182 aaPredicted RBP14.83□□□□□ -0.04
SRP54-203ENST00000553544 RIPOR2Q9Y4F9 1068 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 RANBP2P49792 3224 aaKnown RBP14.83□□□□□ -0.04
SRP54-203ENST00000553544 MROH5Q6ZUA9 1318 aa14.83□□□□□ -0.04
SRP54-203ENST00000553544 PDHXO00330 501 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 OSBPP22059 807 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 GRIK5Q16478 980 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 DIEXFQ68CQ4 756 aaKnown RBP14.82□□□□□ -0.04
SRP54-203ENST00000553544 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.82□□□□□ -0.04
SRP54-203ENST00000553544 SLC17A8Q8NDX2 589 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 KAZALD1Q96I82 304 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 ZNF341Q9BYN7 854 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 PUS3Q9BZE2 481 aaKnown RBP14.82□□□□□ -0.04
SRP54-203ENST00000553544 RNF208Q9H0X6 261 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 A0A0C4DFX4 3053 aa14.82□□□□□ -0.04
SRP54-203ENST00000553544 NBPF7P0C2Y1 421 aaPredicted RBP14.81□□□□□ -0.04
SRP54-203ENST00000553544 CCL5P13501 91 aa14.81□□□□□ -0.04
SRP54-203ENST00000553544 UBXN2AP68543 259 aa14.81□□□□□ -0.04
SRP54-203ENST00000553544 APOBEC3HQ6NTF7 200 aaKnown RBP14.81□□□□□ -0.04
SRP54-203ENST00000553544 SHISA4Q96DD7 197 aa14.81□□□□□ -0.04
SRP54-203ENST00000553544 SUGT1Q9Y2Z0 365 aa14.81□□□□□ -0.04
SRP54-203ENST00000553544 DLL1O00548 723 aa14.8□□□□□ -0.04
SRP54-203ENST00000553544 CTGFP29279 349 aa14.8□□□□□ -0.04
SRP54-203ENST00000553544 HHIPL2Q6UWX4 724 aa14.8□□□□□ -0.04
SRP54-203ENST00000553544 UBE2Q1Q7Z7E8 422 aa14.8□□□□□ -0.04
SRP54-203ENST00000553544 SUCLG2Q96I99 432 aa14.8□□□□□ -0.04
SRP54-203ENST00000553544 MAST3O60307 1309 aa14.79□□□□□ -0.04
SRP54-203ENST00000553544 CAPN2P17655 700 aa14.79□□□□□ -0.04
SRP54-203ENST00000553544 RABL6Q3YEC7 729 aaPredicted RBP14.79□□□□□ -0.04
SRP54-203ENST00000553544 MYPNQ86TC9 1320 aa14.79□□□□□ -0.04
SRP54-203ENST00000553544 PDE8BO95263 885 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 INPP5BP32019 993 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 BCAMP50895 628 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 FCGRTP55899 365 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 FAM151AQ8WW52 585 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 USP44Q9H0E7 712 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 PRO3102Q9H379 93 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 SMC4Q9NTJ3 1288 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 ZNF112Q9UJU3 913 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 KCNH4Q9UQ05 1017 aa14.78□□□□□ -0.04
SRP54-203ENST00000553544 ZBTB7BO15156 539 aaPredicted RBP14.77□□□□□ -0.05
SRP54-203ENST00000553544 SGPL1O95470 568 aa14.77□□□□□ -0.05
SRP54-203ENST00000553544 SLAIN1Q8ND83 568 aa14.77□□□□□ -0.05
SRP54-203ENST00000553544 U2AF1L4Q8WU68 220 aaKnown RBP14.77□□□□□ -0.05
SRP54-203ENST00000553544 PARK7Q99497 189 aaKnown RBP14.77□□□□□ -0.05
SRP54-203ENST00000553544 A0A1W2PPC1 479 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 CXCL11O14625 94 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 EVI5O60447 810 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 FARP2O94887 1054 aaPredicted RBP14.76□□□□□ -0.05
SRP54-203ENST00000553544 TFRCP02786 760 aaKnown RBP14.76□□□□□ -0.05
SRP54-203ENST00000553544 RARSP54136 660 aaKnown RBP14.76□□□□□ -0.05
SRP54-203ENST00000553544 PRKCZQ05513 592 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 LRRC24Q50LG9 513 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 ANKRD44Q8N8A2 993 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 BICC1Q9H694 974 aaKnown RBP14.76□□□□□ -0.05
SRP54-203ENST00000553544 OTOFQ9HC10 1997 aa14.76□□□□□ -0.05
SRP54-203ENST00000553544 ADGRA2Q96PE1 1338 aa14.75□□□□□ -0.05
SRP54-203ENST00000553544 IFIT1P09914 478 aaKnown RBP14.75□□□□□ -0.05
SRP54-203ENST00000553544 BCRP11274 1271 aa14.75□□□□□ -0.05
SRP54-203ENST00000553544 TCP10Q12799 353 aa14.75□□□□□ -0.05
SRP54-203ENST00000553544 MOGSQ13724 837 aa14.75□□□□□ -0.05
SRP54-203ENST00000553544 FASTKD5Q7L8L6 764 aaKnown RBP14.75□□□□□ -0.05
SRP54-203ENST00000553544 WDR66Q8TBY9 1149 aa14.75□□□□□ -0.05
SRP54-203ENST00000553544 UNC93B1Q9H1C4 597 aa14.75□□□□□ -0.05
SRP54-203ENST00000553544 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
SRP54-203ENST00000553544 ADCY3O60266 1144 aa14.74□□□□□ -0.05
SRP54-203ENST00000553544 CYP2C8P10632 490 aa14.74□□□□□ -0.05
SRP54-203ENST00000553544 NOL9Q5SY16 702 aaKnown RBP14.74□□□□□ -0.05
SRP54-203ENST00000553544 GPAT2Q6NUI2 795 aa14.74□□□□□ -0.05
SRP54-203ENST00000553544 GABRQQ9UN88 632 aa14.74□□□□□ -0.05
SRP54-203ENST00000553544 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
SRP54-203ENST00000553544 CDC42EP5Q6NZY7 148 aa14.73□□□□□ -0.05
SRP54-203ENST00000553544 VGLL2Q8N8G2 317 aa14.73□□□□□ -0.05
SRP54-203ENST00000553544 PXYLP1Q8TE99 480 aa14.73□□□□□ -0.05
SRP54-203ENST00000553544 USP40Q9NVE5 1235 aa14.73□□□□□ -0.05
SRP54-203ENST00000553544 ZHX2Q9Y6X8 837 aa14.73□□□□□ -0.05
SRP54-203ENST00000553544 MYH13Q9UKX3 1938 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 ARAP2Q8WZ64 1704 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 KIF16BQ96L93 1317 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 FLT3LGP49771 235 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
SRP54-203ENST00000553544 ARHGAP45Q92619 1136 aa14.72□□□□□ -0.05
SRP54-203ENST00000553544 API5Q9BZZ5 524 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms