RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 MCAMP43121 646 aa28.97■■■□□ 2.23
TDP1-205ENST00000553527 EAF2Q96CJ1 260 aaPredicted RBP28.97■■■□□ 2.23
TDP1-205ENST00000553527 SSC5DA1L4H1 1573 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 PDS5AQ29RF7 1337 aaKnown RBP28.96■■■□□ 2.23
TDP1-205ENST00000553527 ZBTB22O15209 634 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 CDC42EP5Q6NZY7 148 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 ERC1Q8IUD2 1116 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 IL1RAPL2Q9NP60 686 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 USP40Q9NVE5 1235 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 TLR7Q9NYK1 1049 aaKnown RBP28.96■■■□□ 2.23
TDP1-205ENST00000553527 AKAP11Q9UKA4 1901 aa28.96■■■□□ 2.23
TDP1-205ENST00000553527 USP2O75604 605 aaPredicted RBP28.95■■■□□ 2.22
TDP1-205ENST00000553527 HSP90AB4PQ58FF6 505 aa28.95■■■□□ 2.22
TDP1-205ENST00000553527 TEPSINQ96N21 525 aa28.95■■■□□ 2.22
TDP1-205ENST00000553527 DBNLQ9UJU6 430 aaKnown RBP28.95■■■□□ 2.22
TDP1-205ENST00000553527 HSPA8P11142 646 aaKnown RBP28.94■■■□□ 2.22
TDP1-205ENST00000553527 TCP10Q12799 353 aa28.94■■■□□ 2.22
TDP1-205ENST00000553527 LDLRAD1Q5T700 205 aa28.94■■■□□ 2.22
TDP1-205ENST00000553527 SLC10A4Q96EP9 437 aa28.94■■■□□ 2.22
TDP1-205ENST00000553527 RAI14Q9P0K7 980 aa28.94■■■□□ 2.22
TDP1-205ENST00000553527 IREB2P48200 963 aaKnown RBP28.93■■■□□ 2.22
TDP1-205ENST00000553527 MECOMQ03112 1051 aa28.93■■■□□ 2.22
TDP1-205ENST00000553527 AACSQ86V21 672 aa28.93■■■□□ 2.22
TDP1-205ENST00000553527 RHPN1Q8TCX5 695 aa28.93■■■□□ 2.22
TDP1-205ENST00000553527 CLMNQ96JQ2 1002 aa28.93■■■□□ 2.22
TDP1-205ENST00000553527 CSRNP1Q96S65 589 aa28.93■■■□□ 2.22
TDP1-205ENST00000553527 LRP2BPQ9P2M1 347 aa28.93■■■□□ 2.22
TDP1-205ENST00000553527 SLF2Q8IX21 1173 aa28.92■■■□□ 2.22
TDP1-205ENST00000553527 MYO5AQ9Y4I1 1855 aaKnown RBP28.91■■■□□ 2.22
TDP1-205ENST00000553527 MAP3K11Q16584 847 aa28.91■■■□□ 2.22
TDP1-205ENST00000553527 FAM83AQ86UY5 434 aa28.91■■■□□ 2.22
TDP1-205ENST00000553527 NFIAQ12857 509 aa28.9■■■□□ 2.22
TDP1-205ENST00000553527 FKBP1CQ5VVH2 108 aa28.9■■■□□ 2.22
TDP1-205ENST00000553527 BTDP43251 543 aa28.88■■■□□ 2.21
TDP1-205ENST00000553527 ZAP70P43403 619 aa28.88■■■□□ 2.21
TDP1-205ENST00000553527 KIF1BPQ96EK5 621 aa28.88■■■□□ 2.21
TDP1-205ENST00000553527 PRDM10Q9NQV6 1147 aa28.88■■■□□ 2.21
TDP1-205ENST00000553527 GAKO14976 1311 aa28.88■■■□□ 2.21
TDP1-205ENST00000553527 CA12O43570 354 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 TRPA1O75762 1119 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 ANKRD13AQ8IZ07 590 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 CLASRPQ8N2M8 674 aaKnown RBP28.87■■■□□ 2.21
TDP1-205ENST00000553527 ZNF384Q8TF68 577 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 FAM151AQ8WW52 585 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 NSUN4Q96CB9 384 aaKnown RBP28.87■■■□□ 2.21
TDP1-205ENST00000553527 CRBNQ96SW2 442 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 MROH7-TTC4A0A0A0MT08 1334 aa28.87■■■□□ 2.21
TDP1-205ENST00000553527 CASP8AP2Q9UKL3 1982 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 CYP2E1P05181 493 aaPredicted RBP28.86■■■□□ 2.21
TDP1-205ENST00000553527 LDHCP07864 332 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 GSTO1P78417 241 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 SPRYD7Q5W111 196 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 MIGA2Q7L4E1 593 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 TNS4Q8IZW8 715 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 FAM163AQ96GL9 167 aaPredicted RBP28.86■■■□□ 2.21
TDP1-205ENST00000553527 RNF186Q9NXI6 227 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 FAM198AQ9UFP1 575 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 NDUFB9Q9Y6M9 179 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 OTOFQ9HC10 1997 aa28.86■■■□□ 2.21
TDP1-205ENST00000553527 RAB11FIP3O75154 756 aa28.85■■■□□ 2.21
TDP1-205ENST00000553527 ZFPM1Q8IX07 1006 aa28.85■■■□□ 2.21
TDP1-205ENST00000553527 ZNF512BQ96KM6 892 aaPredicted RBP28.85■■■□□ 2.21
TDP1-205ENST00000553527 ELP3Q9H9T3 547 aa28.85■■■□□ 2.21
TDP1-205ENST00000553527 RGS3P49796 1198 aa28.84■■■□□ 2.21
TDP1-205ENST00000553527 PICALMQ13492 652 aa28.84■■■□□ 2.21
TDP1-205ENST00000553527 REM2Q8IYK8 340 aaPredicted RBP28.84■■■□□ 2.21
TDP1-205ENST00000553527 GPR75-ASB3A0A0A6YYF3 556 aa28.83■■■□□ 2.21
TDP1-205ENST00000553527 IFIT2P09913 472 aaKnown RBP28.83■■■□□ 2.21
TDP1-205ENST00000553527 MAP3K9P80192 1104 aa28.83■■■□□ 2.21
TDP1-205ENST00000553527 NAA16Q6N069 864 aaPredicted RBP28.83■■■□□ 2.21
TDP1-205ENST00000553527 HOOK2Q96ED9 719 aa28.83■■■□□ 2.21
TDP1-205ENST00000553527 WNK4Q96J92 1243 aa28.83■■■□□ 2.21
TDP1-205ENST00000553527 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.82■■■□□ 2.2
TDP1-205ENST00000553527 ZSCAN29Q8IWY8 852 aaPredicted RBP28.82■■■□□ 2.2
TDP1-205ENST00000553527 PIH1D3Q9NQM4 214 aaKnown RBP28.82■■■□□ 2.2
TDP1-205ENST00000553527 UNCXA6NJT0 531 aa28.81■■■□□ 2.2
TDP1-205ENST00000553527 DCAF15Q66K64 600 aa28.81■■■□□ 2.2
TDP1-205ENST00000553527 CSADQ9Y600 493 aa28.81■■■□□ 2.2
TDP1-205ENST00000553527 IRX6P78412 446 aaPredicted RBP28.8■■■□□ 2.2
TDP1-205ENST00000553527 VGLL4Q14135 290 aa28.8■■■□□ 2.2
TDP1-205ENST00000553527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.8■■■□□ 2.2
TDP1-205ENST00000553527 WRNIP1Q96S55 665 aa28.8■■■□□ 2.2
TDP1-205ENST00000553527 NOL10Q9BSC4 688 aaKnown RBP28.8■■■□□ 2.2
TDP1-205ENST00000553527 IDI2Q9BXS1 227 aa28.8■■■□□ 2.2
TDP1-205ENST00000553527 WDHD1O75717 1129 aaPredicted RBP28.79■■■□□ 2.2
TDP1-205ENST00000553527 IDH1O75874 414 aaKnown RBP28.79■■■□□ 2.2
TDP1-205ENST00000553527 TM4SF4P48230 202 aa28.79■■■□□ 2.2
TDP1-205ENST00000553527 SREBF2Q12772 1141 aa28.79■■■□□ 2.2
TDP1-205ENST00000553527 CNKSR2Q8WXI2 1034 aa28.79■■■□□ 2.2
TDP1-205ENST00000553527 ZKSCAN4Q969J2 545 aaPredicted RBP28.79■■■□□ 2.2
TDP1-205ENST00000553527 OPTNQ96CV9 577 aa28.79■■■□□ 2.2
TDP1-205ENST00000553527 DDX4Q9NQI0 724 aaKnown RBP28.79■■■□□ 2.2
TDP1-205ENST00000553527 RPAP1Q9BWH6 1393 aaPredicted RBP28.78■■■□□ 2.2
TDP1-205ENST00000553527 SMARCA5O60264 1052 aaPredicted RBP28.78■■■□□ 2.2
TDP1-205ENST00000553527 ENTPD3O75355 529 aa28.78■■■□□ 2.2
TDP1-205ENST00000553527 ZBTB48P10074 688 aaPredicted RBP28.78■■■□□ 2.2
TDP1-205ENST00000553527 GJA5P36382 358 aa28.78■■■□□ 2.2
TDP1-205ENST00000553527 RHBDL3P58872 404 aa28.78■■■□□ 2.2
TDP1-205ENST00000553527 ZNF341Q9BYN7 854 aa28.78■■■□□ 2.2
TDP1-205ENST00000553527 ANTXR1Q9H6X2 564 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms