RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ZC3H13Q5T200 1668 aaKnown RBP6.89□□□□□ -1.31
ATXN3-220ENST00000553491 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 NUP155O75694 1391 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 ANKRD33BA6NCL7 494 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 EREGO14944 169 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-220ENST00000553491 EHHADHQ08426 723 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 AAMPQ13685 434 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-220ENST00000553491 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 PMEPA1Q969W9 287 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-220ENST00000553491 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
ATXN3-220ENST00000553491 STRCQ7RTU9 1775 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 RRBP1Q9P2E9 1410 aaKnown RBP6.87□□□□□ -1.31
ATXN3-220ENST00000553491 TNRQ92752 1358 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 TRPA1O75762 1119 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATXN3-220ENST00000553491 IGHA2P01877 340 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 ERCC3P19447 782 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 SNX29Q8TEQ0 813 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
ATXN3-220ENST00000553491 AMOTL2Q9Y2J4 779 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 PPME1Q9Y570 386 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 MYO3AQ8NEV4 1616 aa6.87□□□□□ -1.31
ATXN3-220ENST00000553491 ABCC3O15438 1527 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 ADGRL2O95490 1459 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATXN3-220ENST00000553491 KIF1BO60333 1816 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-220ENST00000553491 EPHA1P21709 976 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 CDC27P30260 824 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-220ENST00000553491 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-220ENST00000553491 FAM129BQ96TA1 746 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 RBCK1Q9BYM8 510 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-220ENST00000553491 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 DEPDC5O75140 1603 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 MROH1Q8NDA8 1641 aa6.86□□□□□ -1.31
ATXN3-220ENST00000553491 LMTK3Q96Q04 1460 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 ROCK1Q13464 1354 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 POLR1AO95602 1720 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-220ENST00000553491 E9PCH4 1651 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 NDUFB5O43674 189 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 PHACTR2O75167 634 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 NOS3P29474 1203 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 MAP4K3Q8IVH8 894 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-220ENST00000553491 TTC16Q8NEE8 873 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
ATXN3-220ENST00000553491 TET3O43151 1660 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-220ENST00000553491 TXNDC11Q6PKC3 985 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 ANKLE2Q86XL3 938 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-220ENST00000553491 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 OSMRQ99650 979 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 USP21Q9UK80 565 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 PZPP20742 1482 aa6.84□□□□□ -1.31
ATXN3-220ENST00000553491 NPATQ14207 1427 aa6.84□□□□□ -1.32
ATXN3-220ENST00000553491 PIK3C2BO00750 1634 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 UNC13BO14795 1591 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 CEP170BQ9Y4F5 1589 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-220ENST00000553491 PTPRAP18433 802 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
ATXN3-220ENST00000553491 IDI1Q13907 227 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-220ENST00000553491 ZNF326Q5BKZ1 582 aaKnown RBP6.83□□□□□ -1.32
ATXN3-220ENST00000553491 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-220ENST00000553491 CITED4Q96RK1 184 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 EID1Q9Y6B2 187 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 SPHKAPQ2M3C7 1700 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 ZNF142P52746 1687 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-220ENST00000553491 IQGAP3Q86VI3 1631 aa6.83□□□□□ -1.32
ATXN3-220ENST00000553491 UGGT1Q9NYU2 1555 aa6.82□□□□□ -1.32
ATXN3-220ENST00000553491 PRDM15P57071 1507 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-220ENST00000553491 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
ATXN3-220ENST00000553491 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-220ENST00000553491 FSCN2O14926 492 aa6.82□□□□□ -1.32
ATXN3-220ENST00000553491 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
ATXN3-220ENST00000553491 Q6ZS46 218 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms