RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 GNL3LQ9NVN8 582 aaKnown RBP11.71□□□□□ -0.53
CHD8-203ENST00000553283 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
CHD8-203ENST00000553283 LAMB1P07942 1786 aa11.71□□□□□ -0.54
CHD8-203ENST00000553283 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
CHD8-203ENST00000553283 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
CHD8-203ENST00000553283 EN2P19622 333 aaPredicted RBP11.7□□□□□ -0.54
CHD8-203ENST00000553283 INPP5BP32019 993 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 DIXDC1Q155Q3 683 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 CDC42EP5Q6NZY7 148 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 SIL1Q9H173 461 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 HDAC5Q9UQL6 1122 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 DAGLAQ9Y4D2 1042 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
CHD8-203ENST00000553283 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 OTOFQ9HC10 1997 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 SEMA3EO15041 775 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 LDHBP07195 334 aaKnown RBP11.69□□□□□ -0.54
CHD8-203ENST00000553283 CT47B1P0C2W7 299 aaPredicted RBP11.69□□□□□ -0.54
CHD8-203ENST00000553283 KIF22Q14807 665 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
CHD8-203ENST00000553283 HTTP42858 3142 aa11.69□□□□□ -0.54
CHD8-203ENST00000553283 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 ZBTB22O15209 634 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 GNRH1P01148 92 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 PRDX5P30044 214 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 IL15P40933 162 aaPredicted RBP11.68□□□□□ -0.54
CHD8-203ENST00000553283 LACTBP83111 547 aaPredicted RBP11.68□□□□□ -0.54
CHD8-203ENST00000553283 TCP10Q12799 353 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 NFIAQ12857 509 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 ANKRD23Q86SG2 305 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
CHD8-203ENST00000553283 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
CHD8-203ENST00000553283 ARHGAP39Q9C0H5 1083 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 DENND2AQ9ULE3 1009 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
CHD8-203ENST00000553283 PHKA1P46020 1223 aa11.67□□□□□ -0.54
CHD8-203ENST00000553283 PRMT2P55345 433 aa11.67□□□□□ -0.54
CHD8-203ENST00000553283 NOL9Q5SY16 702 aaKnown RBP11.67□□□□□ -0.54
CHD8-203ENST00000553283 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
CHD8-203ENST00000553283 PDHXO00330 501 aa11.66□□□□□ -0.54
CHD8-203ENST00000553283 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
CHD8-203ENST00000553283 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
CHD8-203ENST00000553283 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
CHD8-203ENST00000553283 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
CHD8-203ENST00000553283 IDI2Q9BXS1 227 aa11.66□□□□□ -0.54
CHD8-203ENST00000553283 CPA4Q9UI42 421 aa11.66□□□□□ -0.54
CHD8-203ENST00000553283 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
CHD8-203ENST00000553283 CXCL11O14625 94 aa11.65□□□□□ -0.54
CHD8-203ENST00000553283 ENTPD3O75355 529 aa11.65□□□□□ -0.54
CHD8-203ENST00000553283 ADORA1P30542 326 aa11.65□□□□□ -0.54
CHD8-203ENST00000553283 TIMM10P62072 90 aa11.65□□□□□ -0.54
CHD8-203ENST00000553283 MOGSQ13724 837 aa11.65□□□□□ -0.54
CHD8-203ENST00000553283 HABP4Q5JVS0 413 aaKnown RBP11.65□□□□□ -0.54
CHD8-203ENST00000553283 SH3TC2Q8TF17 1288 aa11.65□□□□□ -0.54
CHD8-203ENST00000553283 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
CHD8-203ENST00000553283 GAKO14976 1311 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 PHF20L1A8MW92 1017 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
CHD8-203ENST00000553283 HOXD10P28358 340 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 CTGFP29279 349 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 PSMC4P43686 418 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 RGS3P49796 1198 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 RASGRF1Q13972 1273 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 ARHGAP45Q92619 1136 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 TRIM47Q96LD4 638 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 MEIS3Q99687 375 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 SRRDQ9UH36 339 aa11.64□□□□□ -0.55
CHD8-203ENST00000553283 PDS5AQ29RF7 1337 aaKnown RBP11.63□□□□□ -0.55
CHD8-203ENST00000553283 ADGRA2Q96PE1 1338 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 ECM2O94769 699 aaPredicted RBP11.63□□□□□ -0.55
CHD8-203ENST00000553283 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
CHD8-203ENST00000553283 GNAI3P08754 354 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
CHD8-203ENST00000553283 MAP3K10Q02779 954 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 SPTY2D1Q68D10 685 aaPredicted RBP11.63□□□□□ -0.55
CHD8-203ENST00000553283 GPAT2Q6NUI2 795 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 SCYL3Q8IZE3 742 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 PARK7Q99497 189 aaKnown RBP11.63□□□□□ -0.55
CHD8-203ENST00000553283 ABCF2Q9UG63 623 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 ZHX2Q9Y6X8 837 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 ATRNL1Q5VV63 1379 aa11.63□□□□□ -0.55
CHD8-203ENST00000553283 A0A1B0GUL7 405 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 CYP2C8P10632 490 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 PTPRAP18433 802 aa11.62□□□□□ -0.55
CHD8-203ENST00000553283 OSBPP22059 807 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms