RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CRKP46108 304 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 SH3RF3Q8TEJ3 882 aaPredicted RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 RIOK1Q9BRS2 568 aaKnown RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 DSCC1Q9BVC3 393 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 CRNKL1Q9BZJ0 848 aaKnown RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 PALD1Q9ULE6 856 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 U3KPZ7 1027 aaPredicted RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 BAZ2AQ9UIF9 1905 aaKnown RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 PATL2C9JE40 543 aaKnown RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 USP5P45974 858 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 TDO2P48775 406 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 FKBP1AP62942 108 aaKnown RBP10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 OGFOD1Q8N543 542 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 NACAP1Q9BZK3 213 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 DAGLAQ9Y4D2 1042 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 PCDHAC2Q9Y5I4 1007 aa10.42□□□□□ -0.74
AC055716.2-201ENST00000552545 MYO3BQ8WXR4 1341 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 FGAP02671 866 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 GNAT2P19087 354 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 HSPA4P34932 840 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 RBM25P49756 843 aaKnown RBP10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 HAND2P61296 217 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 SLC4A8Q2Y0W8 1093 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 RNF20Q5VTR2 975 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 IFNL3Q8IZI9 196 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 NAPBQ9H115 298 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 HDAC9Q9UKV0 1011 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 ZNF541Q9H0D2 1346 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 GPR75-ASB3A0A0A6YYF3 556 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 GSG1L2A8MUP6 293 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 FZD9O00144 591 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 ZKSCAN1P17029 563 aaPredicted RBP10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 NECTIN1Q15223 517 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 RBM26Q5T8P6 1007 aaKnown RBP10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 C9orf131Q5VYM1 1079 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 TMED8Q6PL24 325 aaPredicted RBP10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 TEX11Q8IYF3 940 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 TGFBRAP1Q8WUH2 860 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 DDRGK1Q96HY6 314 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 USP40Q9NVE5 1235 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 CTNNA3Q9UI47 895 aa10.41□□□□□ -0.74
AC055716.2-201ENST00000552545 MINDY4BA8MYZ0 360 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 SLC27A2O14975 620 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 GRIN3BO60391 1043 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 IGSF3O75054 1194 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 ANP32AP39687 249 aaKnown RBP10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 PICALMQ13492 652 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 CFAP100Q494V2 611 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 HHIPL2Q6UWX4 724 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
AC055716.2-201ENST00000552545 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 ZNF213O14771 459 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 FOXP2O15409 715 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 GMPSP49915 693 aaPredicted RBP10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 IMMTQ16891 758 aaKnown RBP10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 AGBL3Q8NEM8 1001 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 FAM163AQ96GL9 167 aaPredicted RBP10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 SNX14Q9Y5W7 946 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 CDK5RAP2Q96SN8 1893 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 GAKO14976 1311 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 EPB41L2O43491 1005 aaKnown RBP10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 CYP21A2P08686 494 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 PLCG2P16885 1265 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 DLGAP5Q15398 846 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 EPB41L4AQ9HCS5 686 aaPredicted RBP10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 SERPINA10Q9UK55 444 aa10.39□□□□□ -0.75
AC055716.2-201ENST00000552545 CACNB3P54284 484 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 PPP4CP60510 307 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 ZDHHC15Q96MV8 337 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 JAKMIP1Q96N16 626 aaKnown RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 GMLQ99445 158 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 TDRD3Q9H7E2 651 aaKnown RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 MCM9Q9NXL9 1143 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 SAP30BPQ9UHR5 308 aaKnown RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 TAF6LQ9Y6J9 622 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 ECM29Q5VYK3 1845 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 CYP2D7A0A087X1C5 515 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 HDLBPQ00341 1268 aaKnown RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 APOBEC3HQ6NTF7 200 aaKnown RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 CDC42EP5Q6NZY7 148 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 PRMT6Q96LA8 375 aaPredicted RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 DCP1AQ9NPI6 582 aaPredicted RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 ATP8A2Q9NTI2 1148 aa10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 CNOT7Q9UIV1 285 aaKnown RBP10.38□□□□□ -0.75
AC055716.2-201ENST00000552545 MYH1P12882 1939 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 DCAF8L1A6NGE4 600 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 USP17L21D6R901 530 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 DDNO94850 711 aaPredicted RBP10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 CASTP20810 708 aaKnown RBP10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 RHBDL3P58872 404 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 ADCK5Q3MIX3 580 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 CERS3Q8IU89 383 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms