RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FAM107BQ9H098 131 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 SETBP1Q9Y6X0 1596 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 ROBO2Q9HCK4 1378 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 A1BGP04217 495 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 UBXN1Q04323 297 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 SPECC1LQ69YQ0 1117 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 MAGEB6Q8N7X4 407 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 PPP2R2CQ9Y2T4 447 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 ADGRB3O60242 1522 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 CMA1P23946 247 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 CCDC96Q2M329 555 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 DNAJC21Q5F1R6 531 aaKnown RBP11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 RNF187Q5TA31 235 aaPredicted RBP11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 CNGA4Q8IV77 575 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 TMTC2Q8N394 836 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 DDX41Q9UJV9 622 aaKnown RBP11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 USP6P35125 1406 aa11.62□□□□□ -0.55
SMARCC2-209ENST00000550164 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 CYP7A1P22680 504 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 STAT6P42226 847 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 USP5P45974 858 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 POSTNQ15063 836 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 MLKLQ8NB16 471 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 ESR2Q92731 530 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 MKNK2Q9HBH9 465 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 SYCP1Q15431 976 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 RILPL1Q5EBL4 403 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 IFIT1BQ5T764 474 aaKnown RBP11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 COPRSQ9NQ92 184 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 MBD4O95243 580 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 RBM6P78332 1123 aaKnown RBP11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 ZNF174Q15697 407 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 ZSCAN26Q16670 478 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 CAVIN4Q5BKX8 364 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 PLA2G4DQ86XP0 818 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
SMARCC2-209ENST00000550164 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 TSPY2A6NKD2 308 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 FGAP02671 866 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 ATP1A3P13637 1013 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 GPATCH11Q8N954 259 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 PCDHA5Q9Y5H7 936 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 EFCAB8A8MWE9 144 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 CLCN6P51797 869 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 IKQ13123 557 aaPredicted RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 CT47A1Q5JQC4 288 aaPredicted RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 GPR161Q8N6U8 529 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 EHBP1Q8NDI1 1231 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 PLIN2Q99541 437 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 A0A1W2PQ27 194 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 A0A1W2PQ64 194 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 A0A1W2PQD8 194 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 MYO1BO43795 1136 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 BMP15O95972 392 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 LRRC24Q50LG9 513 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 CCDC178Q5BJE1 867 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 LINC00301Q8NCQ3 95 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 NAPGQ99747 312 aaPredicted RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 GJB4Q9NTQ9 266 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 RMND1Q9NWS8 449 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 BCCIPQ9P287 314 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
SMARCC2-209ENST00000550164 MCM7P33993 719 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 MNAT1P51948 309 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 TERF2Q15554 542 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 KMT5BQ4FZB7 885 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 CCDC122Q5T0U0 273 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 ALS2CR12Q96Q35 445 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 CTNND2Q9UQB3 1225 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 KRT86O43790 486 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 GTF2A1P52655 376 aaPredicted RBP11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 TMEM87BQ96K49 555 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 GDAP1L1Q96MZ0 367 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 PSMA7O14818 248 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 TAX1BP1Q86VP1 789 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 IQUBQ8NA54 791 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 RABEP2Q9H5N1 569 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms