RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 ZBTB48P10074 688 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 RASGRF1Q13972 1273 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 PRKG1Q13976 671 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 PKN2Q16513 984 aaKnown RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 PRAMEF18Q5VWM3 479 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 MOB2Q70IA6 237 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 CTU1Q7Z7A3 348 aaKnown RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 SPATA5Q8NB90 893 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 PRMT6Q96LA8 375 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 CRBNQ96SW2 442 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 DBNDD2Q9BQY9 259 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 MRIQ9BWK5 157 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 TDRD3Q9H7E2 651 aaKnown RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 RAI14Q9P0K7 980 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 LRP2BPQ9P2M1 347 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 ANGEL1Q9UNK9 670 aaKnown RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 NOP58Q9Y2X3 529 aaKnown RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 MAST2Q6P0Q8 1798 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 CENPFP49454 3210 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 HTTP42858 3142 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 TCP10L2B9ZVM9 353 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 ZBTB22O15209 634 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 PRDX5P30044 214 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 IREB2P48200 963 aaKnown RBP8.89□□□□□ -0.99
PTCH1-219ENST00000549678 SPRYD7Q5W111 196 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 SLC10A4Q96EP9 437 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 PCDHAC2Q9Y5I4 1007 aa8.89□□□□□ -0.99
PTCH1-219ENST00000549678 PDS5AQ29RF7 1337 aaKnown RBP8.88□□□□□ -0.99
PTCH1-219ENST00000549678 SALL1Q9NSC2 1324 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 LDHCP07864 332 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 ARID4AP29374 1257 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-219ENST00000549678 GSTO1P78417 241 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 RASA3Q14644 834 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 GRIK5Q16478 980 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 FKBP1CQ5VVH2 108 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 OTUD7BQ6GQQ9 843 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 ANKRD13AQ8IZ07 590 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 HOOK2Q96ED9 719 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 GPATCH3Q96I76 525 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 LRRCC1Q9C099 1032 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 SNRKQ9NRH2 765 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 HMG20BQ9P0W2 317 aa8.88□□□□□ -0.99
PTCH1-219ENST00000549678 ZNF70Q9UC06 446 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-219ENST00000549678 SUPT16HQ9Y5B9 1047 aaKnown RBP8.88□□□□□ -0.99
PTCH1-219ENST00000549678 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-219ENST00000549678 MCAMP43121 646 aa8.87□□□□□ -0.99
PTCH1-219ENST00000549678 CACNB3P54284 484 aa8.87□□□□□ -0.99
PTCH1-219ENST00000549678 MLLT1Q03111 559 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-219ENST00000549678 HHIPL2Q6UWX4 724 aa8.87□□□□□ -0.99
PTCH1-219ENST00000549678 PI16Q6UXB8 463 aa8.87□□□□□ -0.99
PTCH1-219ENST00000549678 EAF2Q96CJ1 260 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-219ENST00000549678 WNK4Q96J92 1243 aa8.87□□□□□ -0.99
PTCH1-219ENST00000549678 ZDHHC15Q96MV8 337 aa8.87□□□□□ -0.99
PTCH1-219ENST00000549678 DNAJC2Q99543 621 aaKnown RBP8.87□□□□□ -0.99
PTCH1-219ENST00000549678 TLR7Q9NYK1 1049 aaKnown RBP8.87□□□□□ -0.99
PTCH1-219ENST00000549678 DBNLQ9UJU6 430 aaKnown RBP8.87□□□□□ -0.99
PTCH1-219ENST00000549678 MYO5AQ9Y4I1 1855 aaKnown RBP8.87□□□□□ -0.99
PTCH1-219ENST00000549678 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 MKI67P46013 3256 aaKnown RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 GPR25O00155 361 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 IDH1O75874 414 aaKnown RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 BTDP43251 543 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 ZAP70P43403 619 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 TCP10Q12799 353 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 NAA16Q6N069 864 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 TBC1D9Q6ZT07 1266 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 FAM83AQ86UY5 434 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 SIRT2Q8IXJ6 389 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 ZNF296Q8WUU4 475 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 USP40Q9NVE5 1235 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 DAGLAQ9Y4D2 1042 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 DOCK2Q92608 1830 aa8.86□□□□□ -0.99
PTCH1-219ENST00000549678 RPAP1Q9BWH6 1393 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-219ENST00000549678 MROH7-TTC4A0A0A0MT08 1334 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 TESPA1A2RU30 521 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-219ENST00000549678 FKTNO75072 461 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-219ENST00000549678 BAG3O95817 575 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 MECOMQ03112 1051 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 MAP3K12Q12852 859 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 PICALMQ13492 652 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 AAMPQ13685 434 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 TTF1Q15361 905 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-219ENST00000549678 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 TEPSINQ96N21 525 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 BRCA2P51587 3418 aa8.85□□□□□ -0.99
PTCH1-219ENST00000549678 AOX1Q06278 1338 aa8.84□□□□□ -0.99
PTCH1-219ENST00000549678 LAMB1P07942 1786 aa8.84□□□□□ -0.99
PTCH1-219ENST00000549678 MYH7P12883 1935 aa8.84□□□□□ -0.99
PTCH1-219ENST00000549678 CEP290O15078 2479 aa8.84□□□□□ -0.99
PTCH1-219ENST00000549678 SMARCA5O60264 1052 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-219ENST00000549678 TBC1D8O95759 1140 aa8.84□□□□□ -0.99
PTCH1-219ENST00000549678 IRX6P78412 446 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-219ENST00000549678 MAP3K9P80192 1104 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms