RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 FAM151AQ8WW52 585 aa29.79■■■□□ 2.36
USP44-205ENST00000549639 GPR108Q9NPR9 543 aa29.79■■■□□ 2.36
USP44-205ENST00000549639 CSADQ9Y600 493 aa29.79■■■□□ 2.36
USP44-205ENST00000549639 TBC1D8O95759 1140 aa29.78■■■□□ 2.36
USP44-205ENST00000549639 DCAF15Q66K64 600 aa29.78■■■□□ 2.36
USP44-205ENST00000549639 OTUD7BQ6GQQ9 843 aa29.78■■■□□ 2.36
USP44-205ENST00000549639 CDC42EP5Q6NZY7 148 aa29.78■■■□□ 2.36
USP44-205ENST00000549639 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.78■■■□□ 2.36
USP44-205ENST00000549639 RLBP1P12271 317 aa29.77■■■□□ 2.36
USP44-205ENST00000549639 IFNL1Q8IU54 200 aa29.77■■■□□ 2.36
USP44-205ENST00000549639 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.77■■■□□ 2.36
USP44-205ENST00000549639 CTU1Q7Z7A3 348 aaKnown RBP29.76■■■□□ 2.35
USP44-205ENST00000549639 DZIP1Q86YF9 867 aaKnown RBP29.76■■■□□ 2.35
USP44-205ENST00000549639 OPTNQ96CV9 577 aa29.76■■■□□ 2.35
USP44-205ENST00000549639 FAM163AQ96GL9 167 aaPredicted RBP29.76■■■□□ 2.35
USP44-205ENST00000549639 ELP3Q9H9T3 547 aa29.76■■■□□ 2.35
USP44-205ENST00000549639 ABCF2Q9UG63 623 aa29.76■■■□□ 2.35
USP44-205ENST00000549639 OTOFQ9HC10 1997 aa29.75■■■□□ 2.35
USP44-205ENST00000549639 GPR25O00155 361 aa29.75■■■□□ 2.35
USP44-205ENST00000549639 VGLL4Q14135 290 aa29.75■■■□□ 2.35
USP44-205ENST00000549639 USP40Q9NVE5 1235 aa29.75■■■□□ 2.35
USP44-205ENST00000549639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.75■■■□□ 2.35
USP44-205ENST00000549639 GAKO14976 1311 aa29.74■■■□□ 2.35
USP44-205ENST00000549639 TESPA1A2RU30 521 aaPredicted RBP29.74■■■□□ 2.35
USP44-205ENST00000549639 UQCRFS1P1P0C7P4 283 aa29.74■■■□□ 2.35
USP44-205ENST00000549639 ARID4AP29374 1257 aaPredicted RBP29.74■■■□□ 2.35
USP44-205ENST00000549639 OS9Q13438 667 aaPredicted RBP29.74■■■□□ 2.35
USP44-205ENST00000549639 ZNF296Q8WUU4 475 aaPredicted RBP29.74■■■□□ 2.35
USP44-205ENST00000549639 CCDC85CA6NKD9 419 aa29.73■■■□□ 2.35
USP44-205ENST00000549639 GJA5P36382 358 aa29.73■■■□□ 2.35
USP44-205ENST00000549639 ERICH6Q7L0X2 663 aa29.73■■■□□ 2.35
USP44-205ENST00000549639 SPATA5Q8NB90 893 aa29.73■■■□□ 2.35
USP44-205ENST00000549639 ZNF341Q9BYN7 854 aa29.73■■■□□ 2.35
USP44-205ENST00000549639 NOP58Q9Y2X3 529 aaKnown RBP29.73■■■□□ 2.35
USP44-205ENST00000549639 SURF6O75683 361 aaKnown RBP29.72■■■□□ 2.35
USP44-205ENST00000549639 PKN2Q16513 984 aaKnown RBP29.72■■■□□ 2.35
USP44-205ENST00000549639 WRNIP1Q96S55 665 aa29.72■■■□□ 2.35
USP44-205ENST00000549639 C1orf115Q9H7X2 142 aa29.72■■■□□ 2.35
USP44-205ENST00000549639 HMG20BQ9P0W2 317 aa29.72■■■□□ 2.35
USP44-205ENST00000549639 IDI2Q9BXS1 227 aa29.71■■■□□ 2.35
USP44-205ENST00000549639 SPDYE5A6NIY4 337 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 IGF2BP3O00425 579 aaKnown RBP eCLIP29.7■■■□□ 2.35
USP44-205ENST00000549639 FKTNO75072 461 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 GTF2A2P52657 109 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 NFIAQ12857 509 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 TNNI3KQ59H18 835 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 ERO1BQ86YB8 467 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 FPGT-TNNI3KV9GXZ4 949 aa29.7■■■□□ 2.35
USP44-205ENST00000549639 MYH2Q9UKX2 1941 aa29.7■■■□□ 2.34
USP44-205ENST00000549639 ENTPD3O75355 529 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 GSTO1P78417 241 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 TCP10Q12799 353 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 CCDC158Q5M9N0 1113 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 MS4A4AQ96JQ5 239 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 FAM198AQ9UFP1 575 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 MROH7-TTC4A0A0A0MT08 1334 aa29.69■■■□□ 2.34
USP44-205ENST00000549639 MAP4K4O95819 1239 aaPredicted RBP29.68■■■□□ 2.34
USP44-205ENST00000549639 LDHCP07864 332 aa29.68■■■□□ 2.34
USP44-205ENST00000549639 MECOMQ03112 1051 aa29.67■■■□□ 2.34
USP44-205ENST00000549639 PANK1Q8TE04 598 aa29.67■■■□□ 2.34
USP44-205ENST00000549639 OTUD5Q96G74 571 aa29.67■■■□□ 2.34
USP44-205ENST00000549639 SNCAIPQ9Y6H5 919 aa29.67■■■□□ 2.34
USP44-205ENST00000549639 IGSF3O75054 1194 aa29.66■■■□□ 2.34
USP44-205ENST00000549639 CEP85Q6P2H3 762 aa29.66■■■□□ 2.34
USP44-205ENST00000549639 MIGA2Q7L4E1 593 aa29.66■■■□□ 2.34
USP44-205ENST00000549639 ZNF512BQ96KM6 892 aaPredicted RBP29.66■■■□□ 2.34
USP44-205ENST00000549639 ZNF112Q9UJU3 913 aa29.66■■■□□ 2.34
USP44-205ENST00000549639 GPR75-ASB3A0A0A6YYF3 556 aa29.65■■■□□ 2.34
USP44-205ENST00000549639 MCAMP43121 646 aa29.65■■■□□ 2.34
USP44-205ENST00000549639 BTDP43251 543 aa29.65■■■□□ 2.34
USP44-205ENST00000549639 TTC39AQ5SRH9 613 aa29.65■■■□□ 2.34
USP44-205ENST00000549639 ZKSCAN4Q969J2 545 aaPredicted RBP29.65■■■□□ 2.34
USP44-205ENST00000549639 PTPN18Q99952 460 aa29.65■■■□□ 2.34
USP44-205ENST00000549639 R3HDMLQ9H3Y0 253 aa29.65■■■□□ 2.34
USP44-205ENST00000549639 CCL15-CCL14A0A0B4J2E2 113 aa29.64■■■□□ 2.34
USP44-205ENST00000549639 RGS3P49796 1198 aa29.64■■■□□ 2.34
USP44-205ENST00000549639 PPATQ06203 517 aa29.64■■■□□ 2.34
USP44-205ENST00000549639 CCL15Q16663 113 aa29.64■■■□□ 2.34
USP44-205ENST00000549639 CNKSR2Q8WXI2 1034 aa29.64■■■□□ 2.34
USP44-205ENST00000549639 NSUN4Q96CB9 384 aaKnown RBP29.64■■■□□ 2.34
USP44-205ENST00000549639 CHMP4BQ9H444 224 aaKnown RBP29.64■■■□□ 2.34
USP44-205ENST00000549639 RFX7Q2KHR2 1363 aa29.64■■■□□ 2.33
USP44-205ENST00000549639 AK9Q5TCS8 1911 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 NPM3O75607 178 aaKnown RBP29.63■■■□□ 2.33
USP44-205ENST00000549639 CETPP11597 493 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 PPIL2Q13356 520 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 PI16Q6UXB8 463 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 ERC1Q8IUD2 1116 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 BRI3BPQ8WY22 251 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 DBNDD2Q9BQY9 259 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 RAI14Q9P0K7 980 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 DDX19BQ9UMR2 479 aa29.63■■■□□ 2.33
USP44-205ENST00000549639 WDHD1O75717 1129 aaPredicted RBP29.62■■■□□ 2.33
USP44-205ENST00000549639 SNAPC2Q13487 334 aa29.62■■■□□ 2.33
USP44-205ENST00000549639 HSP90AB4PQ58FF6 505 aa29.62■■■□□ 2.33
USP44-205ENST00000549639 ZCCHC17Q9NP64 241 aaKnown RBP29.62■■■□□ 2.33
USP44-205ENST00000549639 LRP2BPQ9P2M1 347 aa29.62■■■□□ 2.33
USP44-205ENST00000549639 RCAN3Q9UKA8 241 aa29.62■■■□□ 2.33
USP44-205ENST00000549639 RGS19P49795 217 aa29.61■■■□□ 2.33
USP44-205ENST00000549639 CRHR2Q13324 411 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms