RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 SPC25Q9HBM1 224 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 CBX8Q9HC52 389 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 TMEM260Q9NX78 707 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 SLC6A14Q9UN76 642 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 PCDHB14Q9Y5E9 798 aa12.86□□□□□ -0.35
PRIM1-204ENST00000549549 C2CD2LO14523 706 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 PERM1Q5SV97 790 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 MICALL1Q8N3F8 863 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
PRIM1-204ENST00000549549 TRERF1Q96PN7 1200 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 COL4A3BPQ9Y5P4 624 aa12.85□□□□□ -0.35
PRIM1-204ENST00000549549 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
PRIM1-204ENST00000549549 DNAJC6O75061 913 aa12.84□□□□□ -0.35
PRIM1-204ENST00000549549 CPB1P15086 417 aa12.84□□□□□ -0.35
PRIM1-204ENST00000549549 ARSHQ5FYA8 562 aa12.84□□□□□ -0.35
PRIM1-204ENST00000549549 TTC9Q92623 222 aa12.84□□□□□ -0.35
PRIM1-204ENST00000549549 FRRS1LQ9P0K9 344 aa12.84□□□□□ -0.35
PRIM1-204ENST00000549549 ESYT3A0FGR9 886 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 FOXR1Q6PIV2 292 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 MDFIQ99750 246 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 PCDH12Q9NPG4 1184 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 TRIM33Q9UPN9 1127 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
PRIM1-204ENST00000549549 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 ANAPC15P60006 121 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 TBC1D8BQ0IIM8 1120 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 SQSTM1Q13501 440 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 IKBKEQ14164 716 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 LARP1BQ659C4 914 aaKnown RBP12.82□□□□□ -0.36
PRIM1-204ENST00000549549 CACTIN-AS1Q8N1I8 211 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 SMG9Q9H0W8 520 aaKnown RBP12.82□□□□□ -0.36
PRIM1-204ENST00000549549 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
PRIM1-204ENST00000549549 DACH1Q9UI36 760 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
PRIM1-204ENST00000549549 MEIS3P2A8K0S8 358 aa12.81□□□□□ -0.36
PRIM1-204ENST00000549549 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
PRIM1-204ENST00000549549 ST8SIA5O15466 376 aa12.81□□□□□ -0.36
PRIM1-204ENST00000549549 GJB6O95452 261 aa12.81□□□□□ -0.36
PRIM1-204ENST00000549549 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
PRIM1-204ENST00000549549 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
PRIM1-204ENST00000549549 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
PRIM1-204ENST00000549549 KIFC2Q96AC6 838 aa12.81□□□□□ -0.36
PRIM1-204ENST00000549549 SOX17Q9H6I2 414 aaPredicted RBP12.81□□□□□ -0.36
PRIM1-204ENST00000549549 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
PRIM1-204ENST00000549549 A0A1W2PQH9 124 aa12.8□□□□□ -0.36
PRIM1-204ENST00000549549 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
PRIM1-204ENST00000549549 GSTP1P09211 210 aaKnown RBP12.8□□□□□ -0.36
PRIM1-204ENST00000549549 SELPP16109 830 aa12.8□□□□□ -0.36
PRIM1-204ENST00000549549 PCBP4P57723 403 aaKnown RBP12.8□□□□□ -0.36
PRIM1-204ENST00000549549 C2orf27AQ580R0 203 aa12.8□□□□□ -0.36
PRIM1-204ENST00000549549 ZNF669Q96BR6 464 aaPredicted RBP12.8□□□□□ -0.36
PRIM1-204ENST00000549549 LACRTQ9GZZ8 138 aa12.8□□□□□ -0.36
PRIM1-204ENST00000549549 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
PRIM1-204ENST00000549549 KLF15Q9UIH9 416 aa12.8□□□□□ -0.36
PRIM1-204ENST00000549549 GFRA2O00451 464 aa12.79□□□□□ -0.36
PRIM1-204ENST00000549549 CDC27P30260 824 aa12.79□□□□□ -0.36
PRIM1-204ENST00000549549 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
PRIM1-204ENST00000549549 RUFY4Q6ZNE9 571 aa12.79□□□□□ -0.36
PRIM1-204ENST00000549549 C16orf86Q6ZW13 317 aa12.79□□□□□ -0.36
PRIM1-204ENST00000549549 THAP3Q8WTV1 239 aaPredicted RBP12.79□□□□□ -0.36
PRIM1-204ENST00000549549 TM9SF2Q99805 663 aa12.79□□□□□ -0.36
PRIM1-204ENST00000549549 GPR25O00155 361 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 GFRA3O60609 400 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 BMP4P12644 408 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 GYS2P54840 703 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 PPP2R5EQ16537 467 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 MTERF2Q49AM1 385 aa12.78□□□□□ -0.36
PRIM1-204ENST00000549549 TAB3Q8N5C8 712 aaPredicted RBP12.78□□□□□ -0.36
PRIM1-204ENST00000549549 ST13P5Q8NFI4 369 aaPredicted RBP12.78□□□□□ -0.36
PRIM1-204ENST00000549549 EIF4EBP3O60516 100 aaPredicted RBP12.77□□□□□ -0.37
PRIM1-204ENST00000549549 EPHA1P21709 976 aa12.77□□□□□ -0.37
PRIM1-204ENST00000549549 ADH7P40394 386 aa12.77□□□□□ -0.37
PRIM1-204ENST00000549549 CABP4P57796 275 aa12.77□□□□□ -0.37
PRIM1-204ENST00000549549 MAP1SQ66K74 1059 aaPredicted RBP12.77□□□□□ -0.37
PRIM1-204ENST00000549549 TTC6Q86TZ1 520 aa12.77□□□□□ -0.37
PRIM1-204ENST00000549549 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.37
PRIM1-204ENST00000549549 METTL14Q9HCE5 456 aaKnown RBP12.77□□□□□ -0.37
PRIM1-204ENST00000549549 LEMD3Q9Y2U8 911 aa12.77□□□□□ -0.37
PRIM1-204ENST00000549549 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
PRIM1-204ENST00000549549 H3BRJ5 948 aa12.76□□□□□ -0.37
PRIM1-204ENST00000549549 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
PRIM1-204ENST00000549549 DDAH1O94760 285 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 ARAFP10398 606 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 CDK8P49336 464 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 FAM178BQ8IXR5 827 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 TMEM40Q8WWA1 233 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
PRIM1-204ENST00000549549 FEZ1Q99689 392 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 SNCAIPQ9Y6H5 919 aa12.75□□□□□ -0.37
PRIM1-204ENST00000549549 MARCH6O60337 910 aa12.74□□□□□ -0.37
PRIM1-204ENST00000549549 HTR3BO95264 441 aa12.74□□□□□ -0.37
PRIM1-204ENST00000549549 C6orf15Q6UXA7 325 aaPredicted RBP12.74□□□□□ -0.37
PRIM1-204ENST00000549549 VWA5B2Q8N398 1253 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms