RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 UBXN2AP68543 259 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 PPATQ06203 517 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 EPHA10Q5JZY3 1008 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 MIGA2Q7L4E1 593 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 ANKRD23Q86SG2 305 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 STAP2Q9UGK3 403 aa13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-206ENST00000549358 A0A1W2PPC1 479 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 SGPL1O95470 568 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 PRKCZQ05513 592 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 UBE4AQ14139 1066 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 TEKT1Q969V4 418 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 TMOD2Q9NZR1 351 aa13.71□□□□□ -0.21
TRAFD1-206ENST00000549358 TRIOBPQ9H2D6 2365 aa13.71□□□□□ -0.22
TRAFD1-206ENST00000549358 PITPNM1O00562 1244 aa13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 INPP5BP32019 993 aa13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 HDLBPQ00341 1268 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 FAM83AQ86UY5 434 aa13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-206ENST00000549358 A0A1B0GUL6 1792 aa13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 FRAT2O75474 233 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 FCGRTP55899 365 aa13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 SLAIN1Q8ND83 568 aa13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 PUS3Q9BZE2 481 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 GABRQQ9UN88 632 aa13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 ARAP2Q8WZ64 1704 aa13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 A0A0C4DFX4 3053 aa13.69□□□□□ -0.22
TRAFD1-206ENST00000549358 ADGRA2Q96PE1 1338 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 F6X3S4 739 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 CYP2C8P10632 490 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 MOGSQ13724 837 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 ZDHHC15Q96MV8 337 aa13.68□□□□□ -0.22
TRAFD1-206ENST00000549358 ADCY3O60266 1144 aa13.67□□□□□ -0.22
TRAFD1-206ENST00000549358 ELNP15502 786 aa13.67□□□□□ -0.22
TRAFD1-206ENST00000549358 FKBP1CQ5VVH2 108 aa13.67□□□□□ -0.22
TRAFD1-206ENST00000549358 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
TRAFD1-206ENST00000549358 KCNH4Q9UQ05 1017 aa13.67□□□□□ -0.22
TRAFD1-206ENST00000549358 LAMA3Q16787 3333 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 GRM8O00222 908 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 BCRP11274 1271 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 FLT3LGP49771 235 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 PARK7Q99497 189 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 MRIQ9BWK5 157 aa13.66□□□□□ -0.22
TRAFD1-206ENST00000549358 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 CEP290O15078 2479 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 INHAP05111 366 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 BCAMP50895 628 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 TCP10Q12799 353 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 FAM151AQ8WW52 585 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
TRAFD1-206ENST00000549358 VAMP4O75379 141 aa13.64□□□□□ -0.23
TRAFD1-206ENST00000549358 HHIPL2Q6UWX4 724 aa13.64□□□□□ -0.23
TRAFD1-206ENST00000549358 Q7L0L9 218 aa13.64□□□□□ -0.23
TRAFD1-206ENST00000549358 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
TRAFD1-206ENST00000549358 CXCL11O14625 94 aa13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 TNPO2O14787 897 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 CAPN2P17655 700 aa13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 BMP8BP34820 402 aa13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 PXYLP1Q8TE99 480 aa13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 GDF15Q99988 308 aa13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 PAK6Q9NQU5 681 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 MAST3O60307 1309 aa13.63□□□□□ -0.23
TRAFD1-206ENST00000549358 RPAP1Q9BWH6 1393 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 NECAB2Q7Z6G3 386 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 DIS3LQ8TF46 1054 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 KAZALD1Q96I82 304 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 ZMYND8Q9ULU4 1186 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 STXBP5LQ9Y2K9 1186 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 SUGT1Q9Y2Z0 365 aa13.62□□□□□ -0.23
TRAFD1-206ENST00000549358 ZHX2Q9Y6X8 837 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms