RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 GCC1Q96CN9 775 aa28.73■■■□□ 2.19
SMARCD1-204ENST00000547637 SNCAIPQ9Y6H5 919 aa28.73■■■□□ 2.19
SMARCD1-204ENST00000547637 MYH13Q9UKX3 1938 aa28.73■■■□□ 2.19
SMARCD1-204ENST00000547637 PPATQ06203 517 aa28.72■■■□□ 2.19
SMARCD1-204ENST00000547637 PPIL2Q13356 520 aa28.72■■■□□ 2.19
SMARCD1-204ENST00000547637 FAM43AQ8N2R8 423 aa28.72■■■□□ 2.19
SMARCD1-204ENST00000547637 ZKSCAN4Q969J2 545 aaPredicted RBP28.72■■■□□ 2.19
SMARCD1-204ENST00000547637 SIL1Q9H173 461 aa28.72■■■□□ 2.19
SMARCD1-204ENST00000547637 DENND2AQ9ULE3 1009 aa28.72■■■□□ 2.19
SMARCD1-204ENST00000547637 SEMA3EO15041 775 aa28.71■■■□□ 2.19
SMARCD1-204ENST00000547637 TLR2O60603 784 aa28.71■■■□□ 2.19
SMARCD1-204ENST00000547637 IL15P40933 162 aaPredicted RBP28.71■■■□□ 2.19
SMARCD1-204ENST00000547637 ATG9AQ7Z3C6 839 aa28.71■■■□□ 2.19
SMARCD1-204ENST00000547637 ZGPATQ8N5A5 531 aaKnown RBP28.71■■■□□ 2.19
SMARCD1-204ENST00000547637 AK9Q5TCS8 1911 aa28.71■■■□□ 2.19
SMARCD1-204ENST00000547637 IRF6O14896 467 aa28.7■■■□□ 2.18
SMARCD1-204ENST00000547637 SLC9C1Q4G0N8 1177 aa28.7■■■□□ 2.18
SMARCD1-204ENST00000547637 MIGA2Q7L4E1 593 aa28.7■■■□□ 2.18
SMARCD1-204ENST00000547637 CDCA7LQ96GN5 454 aa28.7■■■□□ 2.18
SMARCD1-204ENST00000547637 NOB1Q9ULX3 412 aaKnown RBP28.7■■■□□ 2.18
SMARCD1-204ENST00000547637 GNRH1P01148 92 aa28.69■■■□□ 2.18
SMARCD1-204ENST00000547637 DAGLAQ9Y4D2 1042 aa28.69■■■□□ 2.18
SMARCD1-204ENST00000547637 KIAA0100Q14667 2235 aaKnown RBP28.69■■■□□ 2.18
SMARCD1-204ENST00000547637 POTEFA5A3E0 1075 aa28.68■■■□□ 2.18
SMARCD1-204ENST00000547637 BTBD19C9JJ37 291 aa28.68■■■□□ 2.18
SMARCD1-204ENST00000547637 TCP10Q12799 353 aa28.67■■■□□ 2.18
SMARCD1-204ENST00000547637 CDC42EP5Q6NZY7 148 aa28.67■■■□□ 2.18
SMARCD1-204ENST00000547637 SLF2Q8IX21 1173 aa28.67■■■□□ 2.18
SMARCD1-204ENST00000547637 USP40Q9NVE5 1235 aa28.67■■■□□ 2.18
SMARCD1-204ENST00000547637 SALL1Q9NSC2 1324 aa28.67■■■□□ 2.18
SMARCD1-204ENST00000547637 PRMT2P55345 433 aa28.66■■■□□ 2.18
SMARCD1-204ENST00000547637 TRMT2AQ8IZ69 625 aaKnown RBP28.66■■■□□ 2.18
SMARCD1-204ENST00000547637 PRDX5P30044 214 aa28.65■■■□□ 2.18
SMARCD1-204ENST00000547637 DIXDC1Q155Q3 683 aa28.65■■■□□ 2.18
SMARCD1-204ENST00000547637 SLC4A8Q2Y0W8 1093 aa28.65■■■□□ 2.18
SMARCD1-204ENST00000547637 LRRFIP2Q9Y608 721 aaKnown RBP28.65■■■□□ 2.18
SMARCD1-204ENST00000547637 INPP5BP32019 993 aa28.64■■■□□ 2.18
SMARCD1-204ENST00000547637 LACTBP83111 547 aaPredicted RBP28.64■■■□□ 2.18
SMARCD1-204ENST00000547637 ZNF333Q96JL9 665 aa28.64■■■□□ 2.18
SMARCD1-204ENST00000547637 PTCH2Q9Y6C5 1203 aa28.64■■■□□ 2.18
SMARCD1-204ENST00000547637 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.63■■■□□ 2.17
SMARCD1-204ENST00000547637 COPRSQ9NQ92 184 aa28.63■■■□□ 2.17
SMARCD1-204ENST00000547637 ZNF112Q9UJU3 913 aa28.63■■■□□ 2.17
SMARCD1-204ENST00000547637 AKAP2Q9Y2D5 859 aa28.63■■■□□ 2.17
SMARCD1-204ENST00000547637 GNAI3P08754 354 aa28.62■■■□□ 2.17
SMARCD1-204ENST00000547637 HOXD10P28358 340 aa28.62■■■□□ 2.17
SMARCD1-204ENST00000547637 SPTY2D1Q68D10 685 aaPredicted RBP28.62■■■□□ 2.17
SMARCD1-204ENST00000547637 ANKRD23Q86SG2 305 aa28.62■■■□□ 2.17
SMARCD1-204ENST00000547637 ZBTB22O15209 634 aa28.61■■■□□ 2.17
SMARCD1-204ENST00000547637 EN2P19622 333 aaPredicted RBP28.61■■■□□ 2.17
SMARCD1-204ENST00000547637 PHKA1P46020 1223 aa28.61■■■□□ 2.17
SMARCD1-204ENST00000547637 CCDC102BQ68D86 513 aa28.61■■■□□ 2.17
SMARCD1-204ENST00000547637 DZIP1Q86YF9 867 aaKnown RBP28.61■■■□□ 2.17
SMARCD1-204ENST00000547637 ARHGAP45Q92619 1136 aa28.61■■■□□ 2.17
SMARCD1-204ENST00000547637 NFIAQ12857 509 aa28.6■■■□□ 2.17
SMARCD1-204ENST00000547637 NOL9Q5SY16 702 aaKnown RBP28.6■■■□□ 2.17
SMARCD1-204ENST00000547637 ZSCAN29Q8IWY8 852 aaPredicted RBP28.6■■■□□ 2.17
SMARCD1-204ENST00000547637 KCNH4Q9UQ05 1017 aa28.6■■■□□ 2.17
SMARCD1-204ENST00000547637 PA2G4Q9UQ80 394 aaKnown RBP28.6■■■□□ 2.17
SMARCD1-204ENST00000547637 RBBP6Q7Z6E9 1792 aaKnown RBP28.6■■■□□ 2.17
SMARCD1-204ENST00000547637 PDHXO00330 501 aa28.59■■■□□ 2.17
SMARCD1-204ENST00000547637 ENTPD3O75355 529 aa28.59■■■□□ 2.17
SMARCD1-204ENST00000547637 CAP1Q01518 475 aa28.59■■■□□ 2.17
SMARCD1-204ENST00000547637 ABCF2Q9UG63 623 aa28.59■■■□□ 2.17
SMARCD1-204ENST00000547637 PICK1Q9NRD5 415 aa28.58■■■□□ 2.17
SMARCD1-204ENST00000547637 FAM198AQ9UFP1 575 aa28.58■■■□□ 2.17
SMARCD1-204ENST00000547637 CXCL11O14625 94 aa28.57■■■□□ 2.16
SMARCD1-204ENST00000547637 IPO8O15397 1037 aaKnown RBP28.57■■■□□ 2.16
SMARCD1-204ENST00000547637 MVPQ14764 893 aaKnown RBP28.57■■■□□ 2.16
SMARCD1-204ENST00000547637 C17orf99Q6UX52 265 aa28.57■■■□□ 2.16
SMARCD1-204ENST00000547637 MEIS3Q99687 375 aa28.57■■■□□ 2.16
SMARCD1-204ENST00000547637 IDI2Q9BXS1 227 aa28.57■■■□□ 2.16
SMARCD1-204ENST00000547637 SRGAP3O43295 1099 aa28.56■■■□□ 2.16
SMARCD1-204ENST00000547637 TIMM10P62072 90 aa28.56■■■□□ 2.16
SMARCD1-204ENST00000547637 PDS5AQ29RF7 1337 aaKnown RBP28.56■■■□□ 2.16
SMARCD1-204ENST00000547637 PARK7Q99497 189 aaKnown RBP28.56■■■□□ 2.16
SMARCD1-204ENST00000547637 ARHGAP39Q9C0H5 1083 aa28.56■■■□□ 2.16
SMARCD1-204ENST00000547637 CPA4Q9UI42 421 aa28.56■■■□□ 2.16
SMARCD1-204ENST00000547637 FMNL1O95466 1100 aaPredicted RBP28.55■■■□□ 2.16
SMARCD1-204ENST00000547637 PSMC4P43686 418 aa28.55■■■□□ 2.16
SMARCD1-204ENST00000547637 RGS3P49796 1198 aa28.55■■■□□ 2.16
SMARCD1-204ENST00000547637 RARSP54136 660 aaKnown RBP28.55■■■□□ 2.16
SMARCD1-204ENST00000547637 FASTKD5Q7L8L6 764 aaKnown RBP28.55■■■□□ 2.16
SMARCD1-204ENST00000547637 MYH2Q9UKX2 1941 aa28.55■■■□□ 2.16
SMARCD1-204ENST00000547637 ERICH6Q7L0X2 663 aa28.54■■■□□ 2.16
SMARCD1-204ENST00000547637 FAM163AQ96GL9 167 aaPredicted RBP28.54■■■□□ 2.16
SMARCD1-204ENST00000547637 GAKO14976 1311 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 A0A1B0GUL7 405 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 CCER2I3L3R5 266 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 ADORA1P30542 326 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 GORABQ5T7V8 394 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 SCYL3Q8IZE3 742 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 RAET1EQ8TD07 263 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 XAGE2Q96GT9 111 aa28.53■■■□□ 2.16
SMARCD1-204ENST00000547637 MYCP01106 439 aaPredicted RBP28.52■■■□□ 2.16
SMARCD1-204ENST00000547637 RASGRF1Q13972 1273 aa28.52■■■□□ 2.16
SMARCD1-204ENST00000547637 SH3TC2Q8TF17 1288 aa28.52■■■□□ 2.16
SMARCD1-204ENST00000547637 NEUROD6Q96NK8 337 aa28.52■■■□□ 2.16
SMARCD1-204ENST00000547637 SRRDQ9UH36 339 aa28.52■■■□□ 2.16
SMARCD1-204ENST00000547637 LDHCP07864 332 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms