RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ERICH6Q7L0X2 663 aa28.58■■■□□ 2.17
CHFR-222ENST00000544093 ANKRD13AQ8IZ07 590 aa28.58■■■□□ 2.17
CHFR-222ENST00000544093 SLC10A4Q96EP9 437 aa28.58■■■□□ 2.17
CHFR-222ENST00000544093 CSRNP1Q96S65 589 aa28.58■■■□□ 2.17
CHFR-222ENST00000544093 FAM163AQ96GL9 167 aaPredicted RBP28.57■■■□□ 2.16
CHFR-222ENST00000544093 GAKO14976 1311 aa28.56■■■□□ 2.16
CHFR-222ENST00000544093 USP2O75604 605 aaPredicted RBP28.56■■■□□ 2.16
CHFR-222ENST00000544093 CACNB3P54284 484 aa28.56■■■□□ 2.16
CHFR-222ENST00000544093 SREBF2Q12772 1141 aa28.56■■■□□ 2.16
CHFR-222ENST00000544093 TTC39AQ5SRH9 613 aa28.56■■■□□ 2.16
CHFR-222ENST00000544093 ZNF512BQ96KM6 892 aaPredicted RBP28.56■■■□□ 2.16
CHFR-222ENST00000544093 IGSF3O75054 1194 aa28.55■■■□□ 2.16
CHFR-222ENST00000544093 ZBTB48P10074 688 aaPredicted RBP28.55■■■□□ 2.16
CHFR-222ENST00000544093 CDC42EP5Q6NZY7 148 aa28.55■■■□□ 2.16
CHFR-222ENST00000544093 GSTO1P78417 241 aa28.54■■■□□ 2.16
CHFR-222ENST00000544093 SPRYD7Q5W111 196 aa28.54■■■□□ 2.16
CHFR-222ENST00000544093 FAM151AQ8WW52 585 aa28.54■■■□□ 2.16
CHFR-222ENST00000544093 DBNDD2Q9BQY9 259 aa28.54■■■□□ 2.16
CHFR-222ENST00000544093 FZD1Q9UP38 647 aa28.54■■■□□ 2.16
CHFR-222ENST00000544093 MCAMP43121 646 aa28.53■■■□□ 2.16
CHFR-222ENST00000544093 USP40Q9NVE5 1235 aa28.53■■■□□ 2.16
CHFR-222ENST00000544093 RNF186Q9NXI6 227 aa28.53■■■□□ 2.16
CHFR-222ENST00000544093 EXOC6BQ9Y2D4 811 aa28.53■■■□□ 2.16
CHFR-222ENST00000544093 LAMB1P07942 1786 aa28.52■■■□□ 2.16
CHFR-222ENST00000544093 LDHCP07864 332 aa28.52■■■□□ 2.16
CHFR-222ENST00000544093 TM4SF4P48230 202 aa28.52■■■□□ 2.16
CHFR-222ENST00000544093 INHBEP58166 350 aa28.52■■■□□ 2.16
CHFR-222ENST00000544093 DCAF15Q66K64 600 aa28.52■■■□□ 2.16
CHFR-222ENST00000544093 OTOFQ9HC10 1997 aa28.51■■■□□ 2.16
CHFR-222ENST00000544093 MROH7-TTC4A0A0A0MT08 1334 aa28.51■■■□□ 2.15
CHFR-222ENST00000544093 MAP4K4O95819 1239 aaPredicted RBP28.51■■■□□ 2.15
CHFR-222ENST00000544093 MECOMQ03112 1051 aa28.51■■■□□ 2.15
CHFR-222ENST00000544093 TSKSQ9UJT2 592 aa28.51■■■□□ 2.15
CHFR-222ENST00000544093 DBNLQ9UJU6 430 aaKnown RBP28.51■■■□□ 2.15
CHFR-222ENST00000544093 MANSC4A6NHS7 340 aaPredicted RBP28.5■■■□□ 2.15
CHFR-222ENST00000544093 TRPA1O75762 1119 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 PI16Q6UXB8 463 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 CDAN1Q8IWY9 1227 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 EAF2Q96CJ1 260 aaPredicted RBP28.5■■■□□ 2.15
CHFR-222ENST00000544093 WNK4Q96J92 1243 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 CLMNQ96JQ2 1002 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 IDI2Q9BXS1 227 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 RAI14Q9P0K7 980 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 LRP2BPQ9P2M1 347 aa28.5■■■□□ 2.15
CHFR-222ENST00000544093 AK9Q5TCS8 1911 aa28.49■■■□□ 2.15
CHFR-222ENST00000544093 MAP3K9P80192 1104 aa28.49■■■□□ 2.15
CHFR-222ENST00000544093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.49■■■□□ 2.15
CHFR-222ENST00000544093 KIF1BPQ96EK5 621 aa28.49■■■□□ 2.15
CHFR-222ENST00000544093 CSADQ9Y600 493 aa28.49■■■□□ 2.15
CHFR-222ENST00000544093 GPR75-ASB3A0A0A6YYF3 556 aa28.48■■■□□ 2.15
CHFR-222ENST00000544093 ENTPD3O75355 529 aa28.48■■■□□ 2.15
CHFR-222ENST00000544093 MKRN3Q13064 507 aaKnown RBP28.48■■■□□ 2.15
CHFR-222ENST00000544093 C20orf194Q5TEA3 1177 aa28.48■■■□□ 2.15
CHFR-222ENST00000544093 NSUN4Q96CB9 384 aaKnown RBP28.48■■■□□ 2.15
CHFR-222ENST00000544093 MAST2Q6P0Q8 1798 aa28.47■■■□□ 2.15
CHFR-222ENST00000544093 RAB11FIP3O75154 756 aa28.47■■■□□ 2.15
CHFR-222ENST00000544093 BTDP43251 543 aa28.47■■■□□ 2.15
CHFR-222ENST00000544093 NFIAQ12857 509 aa28.47■■■□□ 2.15
CHFR-222ENST00000544093 TBC1D9Q6ZT07 1266 aa28.47■■■□□ 2.15
CHFR-222ENST00000544093 CLASRPQ8N2M8 674 aaKnown RBP28.47■■■□□ 2.15
CHFR-222ENST00000544093 RHPN1Q8TCX5 695 aa28.47■■■□□ 2.15
CHFR-222ENST00000544093 CCDC8Q9H0W5 538 aaPredicted RBP28.47■■■□□ 2.15
CHFR-222ENST00000544093 ALDH1A1P00352 501 aa28.46■■■□□ 2.15
CHFR-222ENST00000544093 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.46■■■□□ 2.15
CHFR-222ENST00000544093 AACSQ86V21 672 aa28.46■■■□□ 2.15
CHFR-222ENST00000544093 SIRT2Q8IXJ6 389 aa28.46■■■□□ 2.15
CHFR-222ENST00000544093 FAM198AQ9UFP1 575 aa28.46■■■□□ 2.15
CHFR-222ENST00000544093 CASP8AP2Q9UKL3 1982 aa28.45■■■□□ 2.14
CHFR-222ENST00000544093 TCP10Q12799 353 aa28.45■■■□□ 2.14
CHFR-222ENST00000544093 NOL10Q9BSC4 688 aaKnown RBP28.45■■■□□ 2.14
CHFR-222ENST00000544093 ZNF341Q9BYN7 854 aa28.45■■■□□ 2.14
CHFR-222ENST00000544093 NPM3O75607 178 aaKnown RBP28.44■■■□□ 2.14
CHFR-222ENST00000544093 VGLL4Q14135 290 aa28.44■■■□□ 2.14
CHFR-222ENST00000544093 WRNIP1Q96S55 665 aa28.44■■■□□ 2.14
CHFR-222ENST00000544093 ELP3Q9H9T3 547 aa28.44■■■□□ 2.14
CHFR-222ENST00000544093 SNRKQ9NRH2 765 aa28.44■■■□□ 2.14
CHFR-222ENST00000544093 TLR7Q9NYK1 1049 aaKnown RBP28.44■■■□□ 2.14
CHFR-222ENST00000544093 RFX7Q2KHR2 1363 aa28.44■■■□□ 2.14
CHFR-222ENST00000544093 RGS3P49796 1198 aa28.43■■■□□ 2.14
CHFR-222ENST00000544093 TMED8Q6PL24 325 aaPredicted RBP28.43■■■□□ 2.14
CHFR-222ENST00000544093 ZNF384Q8TF68 577 aa28.43■■■□□ 2.14
CHFR-222ENST00000544093 DOCK2Q92608 1830 aa28.42■■■□□ 2.14
CHFR-222ENST00000544093 CYP2E1P05181 493 aaPredicted RBP28.42■■■□□ 2.14
CHFR-222ENST00000544093 OTUD7BQ6GQQ9 843 aa28.42■■■□□ 2.14
CHFR-222ENST00000544093 NAA16Q6N069 864 aaPredicted RBP28.42■■■□□ 2.14
CHFR-222ENST00000544093 OPTNQ96CV9 577 aa28.42■■■□□ 2.14
CHFR-222ENST00000544093 CFHR5Q9BXR6 569 aa28.42■■■□□ 2.14
CHFR-222ENST00000544093 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.42■■■□□ 2.14
CHFR-222ENST00000544093 WDHD1O75717 1129 aaPredicted RBP28.41■■■□□ 2.14
CHFR-222ENST00000544093 BAG3O95817 575 aa28.41■■■□□ 2.14
CHFR-222ENST00000544093 NOM1Q5C9Z4 860 aaKnown RBP28.41■■■□□ 2.14
CHFR-222ENST00000544093 IL1RAPL2Q9NP60 686 aa28.41■■■□□ 2.14
CHFR-222ENST00000544093 PLCG2P16885 1265 aa28.4■■■□□ 2.14
CHFR-222ENST00000544093 ZAP70P43403 619 aa28.4■■■□□ 2.14
CHFR-222ENST00000544093 ERO1BQ86YB8 467 aa28.4■■■□□ 2.14
CHFR-222ENST00000544093 IFNL1Q8IU54 200 aa28.4■■■□□ 2.14
CHFR-222ENST00000544093 YTHDC1Q96MU7 727 aaKnown RBP28.4■■■□□ 2.14
CHFR-222ENST00000544093 SPDYE5A6NIY4 337 aa28.39■■■□□ 2.14
CHFR-222ENST00000544093 IFIT2P09913 472 aaKnown RBP28.39■■■□□ 2.14
CHFR-222ENST00000544093 RHBDL3P58872 404 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms