RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 PDE6AP16499 860 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 KCNA3P22001 575 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 YY1P25490 414 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 PBX2P40425 430 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 PTH1RQ03431 593 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 RABEP1Q15276 862 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 DPP8Q6V1X1 898 aaPredicted RBP11.08□□□□□ -0.64
LDHA-220ENST00000542179 ZNF589Q86UQ0 364 aaPredicted RBP11.08□□□□□ -0.64
LDHA-220ENST00000542179 WDR66Q8TBY9 1149 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
LDHA-220ENST00000542179 OSBP2Q969R2 916 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 SNX21Q969T3 373 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 SEC62Q99442 399 aaKnown RBP11.08□□□□□ -0.64
LDHA-220ENST00000542179 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 RTFDC1Q9BY42 306 aaPredicted RBP11.08□□□□□ -0.64
LDHA-220ENST00000542179 CD209Q9NNX6 404 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 MAST3O60307 1309 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 SLX4Q8IY92 1834 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 C6orf229H3BNL8 230 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 M0R2C6 588 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 FRAT2O75474 233 aaPredicted RBP11.07□□□□□ -0.64
LDHA-220ENST00000542179 ZGPATQ8N5A5 531 aaKnown RBP11.07□□□□□ -0.64
LDHA-220ENST00000542179 TTLL6Q8N841 843 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 EYA3Q99504 573 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
LDHA-220ENST00000542179 COA1Q9GZY4 146 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 LRP2BPQ9P2M1 347 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 IQSEC3Q9UPP2 1182 aaPredicted RBP11.07□□□□□ -0.64
LDHA-220ENST00000542179 CD2APQ9Y5K6 639 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
LDHA-220ENST00000542179 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 DPEP1P16444 411 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 BECN1Q14457 450 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 TSGA10IPQ3SY00 556 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
LDHA-220ENST00000542179 MAGEB6Q8N7X4 407 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 PUS7LQ9H0K6 701 aaKnown RBP11.06□□□□□ -0.64
LDHA-220ENST00000542179 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 RBM8AQ9Y5S9 174 aaKnown RBP11.06□□□□□ -0.64
LDHA-220ENST00000542179 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 MYO5AQ9Y4I1 1855 aaKnown RBP11.06□□□□□ -0.64
LDHA-220ENST00000542179 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
LDHA-220ENST00000542179 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 GPAA1O43292 621 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
LDHA-220ENST00000542179 PTGER2P43116 358 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 CACNA1SQ13698 1873 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 CREB3L3Q68CJ9 461 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 OLFM4Q6UX06 510 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 RTKN2Q8IZC4 609 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 SUPT20HQ8NEM7 779 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
LDHA-220ENST00000542179 TM6SF1Q9BZW5 370 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 ABCF2Q9UG63 623 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
LDHA-220ENST00000542179 SLC27A2O14975 620 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
LDHA-220ENST00000542179 SOGA3Q5TF21 947 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 VPS53Q5VIR6 699 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 TBC1D22AQ8WUA7 517 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 NSUN4Q96CB9 384 aaKnown RBP11.04□□□□□ -0.64
LDHA-220ENST00000542179 STRBPQ96SI9 672 aaKnown RBP11.04□□□□□ -0.64
LDHA-220ENST00000542179 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
LDHA-220ENST00000542179 VPS33BQ9H267 617 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 CTNNA3Q9UI47 895 aa11.04□□□□□ -0.64
LDHA-220ENST00000542179 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
LDHA-220ENST00000542179 MAST2Q6P0Q8 1798 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 FOXP2O15409 715 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 GNAT2P19087 354 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 CYP7A1P22680 504 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 CHAF1AQ13111 956 aaPredicted RBP11.03□□□□□ -0.64
LDHA-220ENST00000542179 CCDC93Q567U6 631 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 ZNF384Q8TF68 577 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 DDX27Q96GQ7 796 aaKnown RBP11.03□□□□□ -0.64
LDHA-220ENST00000542179 PSMD1Q99460 953 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 SUGT1Q9Y2Z0 365 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 ZMYM6O95789 1325 aa11.03□□□□□ -0.64
LDHA-220ENST00000542179 CEP350Q5VT06 3117 aa11.02□□□□□ -0.64
LDHA-220ENST00000542179 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.65
LDHA-220ENST00000542179 C21orf2O43822 256 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 LDHBP07195 334 aaKnown RBP11.02□□□□□ -0.65
LDHA-220ENST00000542179 MCM2P49736 904 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 GSTO1P78417 241 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 MECOMQ03112 1051 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 KRT32Q14532 448 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 ALX1Q15699 326 aa11.02□□□□□ -0.65
LDHA-220ENST00000542179 NAA16Q6N069 864 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms