RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 CCDC63Q8NA47 563 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 HINFPQ9BQA5 517 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 STIM2Q9P246 746 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
ERBB2-204ENST00000541774 TDRD12Q587J7 1177 aaKnown RBP12.41□□□□□ -0.42
ERBB2-204ENST00000541774 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 CTAGE1Q96RT6 745 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 PSD3Q9NYI0 1048 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 SPTLC2O15270 562 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 IDEP14735 1019 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 KRT83P78385 493 aa12.41□□□□□ -0.42
ERBB2-204ENST00000541774 ASXL1Q8IXJ9 1541 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 PDCD2Q16342 344 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-204ENST00000541774 C6orf163Q5TEZ5 329 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 RIC3Q7Z5B4 369 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 CNGA4Q8IV77 575 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 RNF10Q8N5U6 811 aaKnown RBP12.4□□□□□ -0.42
ERBB2-204ENST00000541774 IGSF22Q8N9C0 903 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 KLC4Q9NSK0 619 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 USH1CQ9Y6N9 552 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 SMIM23A6NLE4 172 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-204ENST00000541774 TRAF1Q13077 416 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-204ENST00000541774 MTMR6Q9Y217 621 aa12.4□□□□□ -0.42
ERBB2-204ENST00000541774 LONRF3Q496Y0 759 aa12.4□□□□□ -0.43
ERBB2-204ENST00000541774 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.43
ERBB2-204ENST00000541774 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.43
ERBB2-204ENST00000541774 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.43
ERBB2-204ENST00000541774 BOLA2Q9H3K6 86 aa12.4□□□□□ -0.43
ERBB2-204ENST00000541774 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.43
ERBB2-204ENST00000541774 FHOD1Q9Y613 1164 aa12.4□□□□□ -0.43
ERBB2-204ENST00000541774 C8orf74Q6P047 294 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 FAM43BQ6ZT52 329 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-204ENST00000541774 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 TRIM22Q8IYM9 498 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 RNF217Q8TC41 542 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 CDKL5O76039 1030 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
ERBB2-204ENST00000541774 MYO1EQ12965 1108 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 CREB3O43889 395 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 CAND2O75155 1236 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 STX17P56962 302 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 SPAG5Q96R06 1193 aa12.39□□□□□ -0.43
ERBB2-204ENST00000541774 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 UBLCP1Q8WVY7 318 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-204ENST00000541774 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 MYO1BO43795 1136 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 ZMYND10O75800 440 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 MAP7Q14244 749 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 SLC30A9Q6PML9 568 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 ACTR5Q9H9F9 607 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-204ENST00000541774 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 ZFYVE27Q5T4F4 411 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 INSRP06213 1382 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 MAP3K19Q56UN5 1328 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 MACROD2A1Z1Q3 448 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 PAX7P23759 505 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 SCRN1Q12765 414 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 CUL4AQ13619 759 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 CRYMQ14894 314 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 ABTB1Q969K4 478 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-204ENST00000541774 THOC1Q96FV9 657 aaKnown RBP12.38□□□□□ -0.43
ERBB2-204ENST00000541774 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
ERBB2-204ENST00000541774 A0A087WWV3 80 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-204ENST00000541774 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 SUGP1Q8IWZ8 645 aaKnown RBP12.37□□□□□ -0.43
ERBB2-204ENST00000541774 VCX3BQ9H321 246 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 IL16Q14005 1332 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 TADA3O75528 432 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 TAF11Q15544 211 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 SNX14Q9Y5W7 946 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 SAR1BQ9Y6B6 198 aa12.37□□□□□ -0.43
ERBB2-204ENST00000541774 GOLGA8FQ08AF8 430 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 GOLGA8DPQ0D2H9 430 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 CD248Q9HCU0 757 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms