RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ECE1P42892 770 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 TNNI2P48788 182 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 FKBP1BP68106 108 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 TMEM39BQ9GZU3 492 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 DCTPP1Q9H773 170 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
SNHG1-215ENST00000540904 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
SNHG1-215ENST00000540904 GSTO1P78417 241 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 SUPT20HL1Q3ZLR7 823 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
SNHG1-215ENST00000540904 RGMBQ6NW40 437 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 EXOC6Q8TAG9 804 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 ZNF384Q8TF68 577 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
SNHG1-215ENST00000540904 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
SNHG1-215ENST00000540904 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
SNHG1-215ENST00000540904 USP40Q9NVE5 1235 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 FZD1Q9UP38 647 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 GAKO14976 1311 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.61
SNHG1-215ENST00000540904 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
SNHG1-215ENST00000540904 AOC2O75106 756 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 BTDP43251 543 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 TCP10Q12799 353 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
SNHG1-215ENST00000540904 ARMC9Q7Z3E5 817 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 TEPSINQ96N21 525 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 ANGEL1Q9UNK9 670 aaKnown RBP11.26□□□□□ -0.61
SNHG1-215ENST00000540904 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
SNHG1-215ENST00000540904 IDH1O75874 414 aaKnown RBP11.25□□□□□ -0.61
SNHG1-215ENST00000540904 LDHCP07864 332 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 IRX6P78412 446 aaPredicted RBP11.25□□□□□ -0.61
SNHG1-215ENST00000540904 NFIAQ12857 509 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 AAMPQ13685 434 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 BOLA2Q9H3K6 86 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 ANTXR1Q9H6X2 564 aa11.25□□□□□ -0.61
SNHG1-215ENST00000540904 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
SNHG1-215ENST00000540904 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
SNHG1-215ENST00000540904 PAPPA2Q9BXP8 1791 aa11.24□□□□□ -0.61
SNHG1-215ENST00000540904 GPR75-ASB3A0A0A6YYF3 556 aa11.24□□□□□ -0.61
SNHG1-215ENST00000540904 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
SNHG1-215ENST00000540904 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
SNHG1-215ENST00000540904 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
SNHG1-215ENST00000540904 NOL10Q9BSC4 688 aaKnown RBP11.24□□□□□ -0.61
SNHG1-215ENST00000540904 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
SNHG1-215ENST00000540904 FAM155AB1AL88 458 aaPredicted RBP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 GOLIM4O00461 696 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 SLC10A3P09131 477 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 ATP5JP18859 108 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 CYP7A1P22680 504 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 MAP2K2P36507 400 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 RGS3P49796 1198 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 RHBDL3P58872 404 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 MAP3K12Q12852 859 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 NOGQ13253 232 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 PICALMQ13492 652 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 ZFPM1Q8IX07 1006 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 EDC3Q96F86 508 aaKnown RBP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 GPATCH3Q96I76 525 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
SNHG1-215ENST00000540904 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
SNHG1-215ENST00000540904 USP2O75604 605 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 WDHD1O75717 1129 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 BAG3O95817 575 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 MAP3K11Q16584 847 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 LDLRAD1Q5T700 205 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 ANKRD45Q5TZF3 282 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 TSHZ3Q63HK5 1081 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 MAGEB6Q8N7X4 407 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 SH3RF3Q8TEJ3 882 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 HOOK2Q96ED9 719 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 CLMNQ96JQ2 1002 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 ZIC5Q96T25 663 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 HAUS7Q99871 368 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
SNHG1-215ENST00000540904 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
SNHG1-215ENST00000540904 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms