RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MYH2Q9UKX2 1941 aa25.9■■□□□ 1.74
CHFR-217ENST00000540537 RLBP1P12271 317 aa25.9■■□□□ 1.74
CHFR-217ENST00000540537 CDC42EP5Q6NZY7 148 aa25.9■■□□□ 1.74
CHFR-217ENST00000540537 CTU1Q7Z7A3 348 aaKnown RBP25.9■■□□□ 1.74
CHFR-217ENST00000540537 SSH3Q8TE77 659 aa25.9■■□□□ 1.74
CHFR-217ENST00000540537 ZNF296Q8WUU4 475 aaPredicted RBP25.9■■□□□ 1.74
CHFR-217ENST00000540537 NEUROD6Q96NK8 337 aa25.9■■□□□ 1.74
CHFR-217ENST00000540537 CCDC85CA6NKD9 419 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 GPR25O00155 361 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 ATP8B2P98198 1209 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 VGLL4Q14135 290 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 FAM151AQ8WW52 585 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 OPTNQ96CV9 577 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 CSADQ9Y600 493 aa25.89■■□□□ 1.74
CHFR-217ENST00000540537 ZBTB7BO15156 539 aaPredicted RBP25.88■■□□□ 1.73
CHFR-217ENST00000540537 DCAF15Q66K64 600 aa25.88■■□□□ 1.73
CHFR-217ENST00000540537 SPTY2D1Q68D10 685 aaPredicted RBP25.88■■□□□ 1.73
CHFR-217ENST00000540537 TESPA1A2RU30 521 aaPredicted RBP25.87■■□□□ 1.73
CHFR-217ENST00000540537 IGF2BP3O00425 579 aaKnown RBP eCLIP25.87■■□□□ 1.73
CHFR-217ENST00000540537 GORABQ5T7V8 394 aa25.87■■□□□ 1.73
CHFR-217ENST00000540537 ABCF2Q9UG63 623 aa25.87■■□□□ 1.73
CHFR-217ENST00000540537 GAKO14976 1311 aa25.87■■□□□ 1.73
CHFR-217ENST00000540537 DZIP1Q86YF9 867 aaKnown RBP25.86■■□□□ 1.73
CHFR-217ENST00000540537 SLF2Q8IX21 1173 aa25.86■■□□□ 1.73
CHFR-217ENST00000540537 C1orf115Q9H7X2 142 aa25.86■■□□□ 1.73
CHFR-217ENST00000540537 GPR108Q9NPR9 543 aa25.86■■□□□ 1.73
CHFR-217ENST00000540537 USP40Q9NVE5 1235 aa25.86■■□□□ 1.73
CHFR-217ENST00000540537 AK9Q5TCS8 1911 aa25.86■■□□□ 1.73
CHFR-217ENST00000540537 ARID4AP29374 1257 aaPredicted RBP25.85■■□□□ 1.73
CHFR-217ENST00000540537 NFIAQ12857 509 aa25.85■■□□□ 1.73
CHFR-217ENST00000540537 OTUD7BQ6GQQ9 843 aa25.85■■□□□ 1.73
CHFR-217ENST00000540537 FAM163AQ96GL9 167 aaPredicted RBP25.85■■□□□ 1.73
CHFR-217ENST00000540537 WRNIP1Q96S55 665 aa25.85■■□□□ 1.73
CHFR-217ENST00000540537 R3HDMLQ9H3Y0 253 aa25.85■■□□□ 1.73
CHFR-217ENST00000540537 FKTNO75072 461 aa25.84■■□□□ 1.73
CHFR-217ENST00000540537 ZNF341Q9BYN7 854 aa25.84■■□□□ 1.73
CHFR-217ENST00000540537 HMG20BQ9P0W2 317 aa25.84■■□□□ 1.73
CHFR-217ENST00000540537 FAM198AQ9UFP1 575 aa25.84■■□□□ 1.73
CHFR-217ENST00000540537 SNCAIPQ9Y6H5 919 aa25.84■■□□□ 1.73
CHFR-217ENST00000540537 SPDYE5A6NIY4 337 aa25.83■■□□□ 1.73
CHFR-217ENST00000540537 TCP10Q12799 353 aa25.83■■□□□ 1.73
CHFR-217ENST00000540537 OS9Q13438 667 aaPredicted RBP25.83■■□□□ 1.73
CHFR-217ENST00000540537 PKN2Q16513 984 aaKnown RBP25.83■■□□□ 1.73
CHFR-217ENST00000540537 ERICH6Q7L0X2 663 aa25.83■■□□□ 1.73
CHFR-217ENST00000540537 SPATA5Q8NB90 893 aa25.83■■□□□ 1.73
CHFR-217ENST00000540537 CNKSR2Q8WXI2 1034 aa25.83■■□□□ 1.73
CHFR-217ENST00000540537 MS4A4AQ96JQ5 239 aa25.83■■□□□ 1.73
CHFR-217ENST00000540537 SURF6O75683 361 aaKnown RBP25.82■■□□□ 1.72
CHFR-217ENST00000540537 UQCRFS1P1P0C7P4 283 aa25.82■■□□□ 1.72
CHFR-217ENST00000540537 GTF2A2P52657 109 aa25.82■■□□□ 1.72
CHFR-217ENST00000540537 OTUD5Q96G74 571 aa25.82■■□□□ 1.72
CHFR-217ENST00000540537 PTPN18Q99952 460 aa25.82■■□□□ 1.72
CHFR-217ENST00000540537 IDI2Q9BXS1 227 aa25.82■■□□□ 1.72
CHFR-217ENST00000540537 NOP58Q9Y2X3 529 aaKnown RBP25.82■■□□□ 1.72
CHFR-217ENST00000540537 RFX7Q2KHR2 1363 aa25.82■■□□□ 1.72
CHFR-217ENST00000540537 MS4A1P11836 297 aa25.81■■□□□ 1.72
CHFR-217ENST00000540537 TNNI3KQ59H18 835 aa25.81■■□□□ 1.72
CHFR-217ENST00000540537 ERO1BQ86YB8 467 aa25.81■■□□□ 1.72
CHFR-217ENST00000540537 ZKSCAN4Q969J2 545 aaPredicted RBP25.81■■□□□ 1.72
CHFR-217ENST00000540537 FPGT-TNNI3KV9GXZ4 949 aa25.81■■□□□ 1.72
CHFR-217ENST00000540537 MROH7-TTC4A0A0A0MT08 1334 aa25.81■■□□□ 1.72
CHFR-217ENST00000540537 ENTPD3O75355 529 aa25.8■■□□□ 1.72
CHFR-217ENST00000540537 MECOMQ03112 1051 aa25.8■■□□□ 1.72
CHFR-217ENST00000540537 PI16Q6UXB8 463 aa25.8■■□□□ 1.72
CHFR-217ENST00000540537 MIGA2Q7L4E1 593 aa25.8■■□□□ 1.72
CHFR-217ENST00000540537 PANK1Q8TE04 598 aa25.8■■□□□ 1.72
CHFR-217ENST00000540537 CCL15-CCL14A0A0B4J2E2 113 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 MCAMP43121 646 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 BTDP43251 543 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 RGS3P49796 1198 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 CCL15Q16663 113 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 BRI3BPQ8WY22 251 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 ZNF112Q9UJU3 913 aa25.79■■□□□ 1.72
CHFR-217ENST00000540537 RGS19P49795 217 aa25.78■■□□□ 1.72
CHFR-217ENST00000540537 GSTO1P78417 241 aa25.78■■□□□ 1.72
CHFR-217ENST00000540537 CRHR2Q13324 411 aa25.78■■□□□ 1.72
CHFR-217ENST00000540537 CEP85Q6P2H3 762 aa25.78■■□□□ 1.72
CHFR-217ENST00000540537 ZNF384Q8TF68 577 aa25.78■■□□□ 1.72
CHFR-217ENST00000540537 DOCK2Q92608 1830 aa25.78■■□□□ 1.72
CHFR-217ENST00000540537 GPR75-ASB3A0A0A6YYF3 556 aa25.77■■□□□ 1.72
CHFR-217ENST00000540537 LDHCP07864 332 aa25.77■■□□□ 1.72
CHFR-217ENST00000540537 INPP5BP32019 993 aa25.77■■□□□ 1.72
CHFR-217ENST00000540537 PPIL2Q13356 520 aa25.77■■□□□ 1.72
CHFR-217ENST00000540537 CCDC158Q5M9N0 1113 aa25.77■■□□□ 1.72
CHFR-217ENST00000540537 ZFPM1Q8IX07 1006 aa25.77■■□□□ 1.72
CHFR-217ENST00000540537 NSUN4Q96CB9 384 aaKnown RBP25.77■■□□□ 1.72
CHFR-217ENST00000540537 WDHD1O75717 1129 aaPredicted RBP25.76■■□□□ 1.71
CHFR-217ENST00000540537 PPATQ06203 517 aa25.76■■□□□ 1.71
CHFR-217ENST00000540537 TTC39AQ5SRH9 613 aa25.76■■□□□ 1.71
CHFR-217ENST00000540537 TBC1D9Q6ZT07 1266 aa25.76■■□□□ 1.71
CHFR-217ENST00000540537 DBNDD2Q9BQY9 259 aa25.76■■□□□ 1.71
CHFR-217ENST00000540537 ATRNL1Q5VV63 1379 aa25.76■■□□□ 1.71
CHFR-217ENST00000540537 MAP4K4O95819 1239 aaPredicted RBP25.75■■□□□ 1.71
CHFR-217ENST00000540537 CETPP11597 493 aa25.75■■□□□ 1.71
CHFR-217ENST00000540537 SNAPC2Q13487 334 aa25.75■■□□□ 1.71
CHFR-217ENST00000540537 NOL9Q5SY16 702 aaKnown RBP25.75■■□□□ 1.71
CHFR-217ENST00000540537 RAI14Q9P0K7 980 aa25.75■■□□□ 1.71
CHFR-217ENST00000540537 HPS5Q9UPZ3 1129 aa25.75■■□□□ 1.71
CHFR-217ENST00000540537 IRF6O14896 467 aa25.74■■□□□ 1.71
CHFR-217ENST00000540537 RHBDL3P58872 404 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms