RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 POLR3EQ9NVU0 708 aa7.78□□□□□ -1.16
SCAPER-203ENST00000538941 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 EPS15P42566 896 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 TTF1Q15361 905 aaPredicted RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CYP26C1Q6V0L0 522 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 VSTM4Q8IW00 320 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 DHX58Q96C10 678 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 GOLPH3LQ9H4A5 285 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CLIC4Q9Y696 253 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CARMIL3Q8ND23 1372 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 IGSF1Q8N6C5 1336 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 ERLIN2O94905 339 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 POSTNQ15063 836 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 METTL24Q5JXM2 366 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 LMBR1LQ6UX01 489 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 TMTC1Q8IUR5 882 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 EDC3Q96F86 508 aaKnown RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 DESI2Q9BSY9 194 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 FANCLQ9NW38 375 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CWC25Q9NXE8 425 aaPredicted RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 USP42Q9H9J4 1324 aaKnown RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 STX17P56962 302 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CCDC82Q8N4S0 544 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 OTUD6BQ8N6M0 293 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 LINC00301Q8NCQ3 95 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 MYCBPQ99417 103 aaPredicted RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 PAIP2Q9BPZ3 127 aaKnown RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 IL25Q9H293 177 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 SALL3Q9BXA9 1300 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 PTPRMP28827 1452 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 PDIA3P30101 505 aaKnown RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 NF2P35240 595 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CCDC51Q96ER9 411 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 RBM33Q96EV2 1170 aaKnown RBP7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CAPZA3Q96KX2 299 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 CDC23Q9UJX2 597 aa7.77□□□□□ -1.17
SCAPER-203ENST00000538941 SYNRGQ9UMZ2 1314 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 GOLGA6CA6NDK9 693 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 A6NNZ2 444 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 RNMTO43148 476 aaKnown RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 CYP21A2P08686 494 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 GOLGA6DP0CG33 693 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 TUBB8Q3ZCM7 444 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 CT47A1Q5JQC4 288 aaPredicted RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 RBM43Q6ZSC3 357 aaKnown RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 AMOTL1Q8IY63 956 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 TAF4BQ92750 862 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 GOLGA6AQ9NYA3 693 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 ADGRL3Q9HAR2 1447 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 PXDNLA1KZ92 1463 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 SNRPA1P09661 255 aaKnown RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 RILPL1Q5EBL4 403 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 E4F1Q66K89 784 aaPredicted RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 ADAM21Q9UKJ8 722 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 CRB1P82279 1406 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 INPP5BP32019 993 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 ARMCX5Q6P1M9 558 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 B4GALNT4Q76KP1 1039 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 FAM114A1Q8IWE2 563 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 RNF41Q9H4P4 317 aaPredicted RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 TLR7Q9NYK1 1049 aaKnown RBP7.76□□□□□ -1.17
SCAPER-203ENST00000538941 PHF8Q9UPP1 1060 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 NDUFB9Q9Y6M9 179 aa7.76□□□□□ -1.17
SCAPER-203ENST00000538941 TADA3O75528 432 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 TRIM21P19474 475 aaKnown RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 MATR3P43243 847 aaKnown RBP eCLIP7.75□□□□□ -1.173e-6■■■■□ 22.9
SCAPER-203ENST00000538941 KRT40Q6A162 431 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 EFCAB13Q8IY85 973 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 TANGO6Q9C0B7 1094 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 NEXMIFQ5QGS0 1516 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 PPLO60437 1756 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 KIF20BQ96Q89 1820 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 RTN1Q16799 776 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 CCDC122Q5T0U0 273 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 GBP6Q6ZN66 633 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 VPS37DQ86XT2 251 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 FMR1NBQ8N0W7 255 aaPredicted RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 BANK1Q8NDB2 785 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 CDK5RAP3Q96JB5 506 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 RPGRIP1Q96KN7 1286 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 CEP89Q96ST8 783 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 SEC62Q99442 399 aaKnown RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 HAUS7Q99871 368 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 METTL22Q9BUU2 404 aaPredicted RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 L2HGDHQ9H9P8 463 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 TRIM75PA6NK02 468 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 POLR2DO15514 142 aaKnown RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 TACC1O75410 805 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 NEFHP12036 1026 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 H2AFXP16104 143 aaPredicted RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 UBXN1Q04323 297 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 GOLGA8FQ08AF8 430 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 GOLGA8DPQ0D2H9 430 aa7.75□□□□□ -1.17
SCAPER-203ENST00000538941 IFIT5Q13325 482 aaKnown RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 TRMT44Q8IYL2 757 aaKnown RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
SCAPER-203ENST00000538941 KRT23Q9C075 422 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms