RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 XAGE2Q96GT9 111 aa18.45■□□□□ 0.54
LRRK1-211ENST00000538064 ELP3Q9H9T3 547 aa18.45■□□□□ 0.54
LRRK1-211ENST00000538064 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
LRRK1-211ENST00000538064 RFX7Q2KHR2 1363 aa18.44■□□□□ 0.54
LRRK1-211ENST00000538064 GPR25O00155 361 aa18.44■□□□□ 0.54
LRRK1-211ENST00000538064 IGF2BP3O00425 579 aaKnown RBP eCLIP18.44■□□□□ 0.54
LRRK1-211ENST00000538064 OPTNQ96CV9 577 aa18.44■□□□□ 0.54
LRRK1-211ENST00000538064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
LRRK1-211ENST00000538064 GAKO14976 1311 aa18.44■□□□□ 0.54
LRRK1-211ENST00000538064 TESPA1A2RU30 521 aaPredicted RBP18.43■□□□□ 0.54
LRRK1-211ENST00000538064 MAP3K9P80192 1104 aa18.43■□□□□ 0.54
LRRK1-211ENST00000538064 CDC42EP5Q6NZY7 148 aa18.43■□□□□ 0.54
LRRK1-211ENST00000538064 FAM151AQ8WW52 585 aa18.43■□□□□ 0.54
LRRK1-211ENST00000538064 CSADQ9Y600 493 aa18.43■□□□□ 0.54
LRRK1-211ENST00000538064 RLBP1P12271 317 aa18.42■□□□□ 0.54
LRRK1-211ENST00000538064 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
LRRK1-211ENST00000538064 POLA2Q14181 598 aa18.42■□□□□ 0.54
LRRK1-211ENST00000538064 DCAF15Q66K64 600 aa18.42■□□□□ 0.54
LRRK1-211ENST00000538064 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
LRRK1-211ENST00000538064 R3HDMLQ9H3Y0 253 aa18.42■□□□□ 0.54
LRRK1-211ENST00000538064 SPDYE5A6NIY4 337 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 FKTNO75072 461 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 NFIAQ12857 509 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 DZIP1Q86YF9 867 aaKnown RBP18.41■□□□□ 0.54
LRRK1-211ENST00000538064 SSH3Q8TE77 659 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 NEUROD6Q96NK8 337 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 WRNIP1Q96S55 665 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 SNCAIPQ9Y6H5 919 aa18.41■□□□□ 0.54
LRRK1-211ENST00000538064 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
LRRK1-211ENST00000538064 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
LRRK1-211ENST00000538064 SPTY2D1Q68D10 685 aaPredicted RBP18.4■□□□□ 0.54
LRRK1-211ENST00000538064 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
LRRK1-211ENST00000538064 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
LRRK1-211ENST00000538064 MS4A4AQ96JQ5 239 aa18.4■□□□□ 0.54
LRRK1-211ENST00000538064 ZNF341Q9BYN7 854 aa18.4■□□□□ 0.54
LRRK1-211ENST00000538064 C1orf115Q9H7X2 142 aa18.4■□□□□ 0.54
LRRK1-211ENST00000538064 ABCF2Q9UG63 623 aa18.4■□□□□ 0.54
LRRK1-211ENST00000538064 DOCK1Q14185 1865 aa18.39■□□□□ 0.54
LRRK1-211ENST00000538064 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.54
LRRK1-211ENST00000538064 ATP8B2P98198 1209 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 SLF2Q8IX21 1173 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 GPR108Q9NPR9 543 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 FAM198AQ9UFP1 575 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 ATRNL1Q5VV63 1379 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 CDK5RAP2Q96SN8 1893 aa18.39■□□□□ 0.53
LRRK1-211ENST00000538064 FOCADQ5VW36 1801 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 ZBTB7BO15156 539 aaPredicted RBP18.38■□□□□ 0.53
LRRK1-211ENST00000538064 RGS19P49795 217 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 GTF2A2P52657 109 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 TCP10Q12799 353 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 SPATA5Q8NB90 893 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 BRI3BPQ8WY22 251 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 FAM163AQ96GL9 167 aaPredicted RBP18.38■□□□□ 0.53
LRRK1-211ENST00000538064 PTPN18Q99952 460 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 IDI2Q9BXS1 227 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
LRRK1-211ENST00000538064 CCL15-CCL14A0A0B4J2E2 113 aa18.37■□□□□ 0.53
LRRK1-211ENST00000538064 CRHR2Q13324 411 aa18.37■□□□□ 0.53
LRRK1-211ENST00000538064 CCL15Q16663 113 aa18.37■□□□□ 0.53
LRRK1-211ENST00000538064 ERICH6Q7L0X2 663 aa18.37■□□□□ 0.53
LRRK1-211ENST00000538064 ZKSCAN4Q969J2 545 aaPredicted RBP18.37■□□□□ 0.53
LRRK1-211ENST00000538064 HPS5Q9UPZ3 1129 aa18.37■□□□□ 0.53
LRRK1-211ENST00000538064 PTPRFP10586 1907 aa18.37■□□□□ 0.53
LRRK1-211ENST00000538064 ENTPD3O75355 529 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 UQCRFS1P1P0C7P4 283 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 MCAMP43121 646 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 BTDP43251 543 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 RGS3P49796 1198 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 MECOMQ03112 1051 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 PPIL2Q13356 520 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
LRRK1-211ENST00000538064 TNNI3KQ59H18 835 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 PI16Q6UXB8 463 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 MIGA2Q7L4E1 593 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 PHIPQ8WWQ0 1821 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 ZNF112Q9UJU3 913 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
LRRK1-211ENST00000538064 FPGT-TNNI3KV9GXZ4 949 aa18.36■□□□□ 0.53
LRRK1-211ENST00000538064 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
LRRK1-211ENST00000538064 COL2A1P02458 1487 aaPredicted RBP18.35■□□□□ 0.53
LRRK1-211ENST00000538064 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
LRRK1-211ENST00000538064 ZNF384Q8TF68 577 aa18.35■□□□□ 0.53
LRRK1-211ENST00000538064 GPR75-ASB3A0A0A6YYF3 556 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
LRRK1-211ENST00000538064 WDHD1O75717 1129 aaPredicted RBP18.34■□□□□ 0.53
LRRK1-211ENST00000538064 CETPP11597 493 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 INPP5BP32019 993 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 GSTO1P78417 241 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 PPATQ06203 517 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 NOL9Q5SY16 702 aaKnown RBP18.34■□□□□ 0.53
LRRK1-211ENST00000538064 CEP85Q6P2H3 762 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 ZFPM1Q8IX07 1006 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 PANK1Q8TE04 598 aa18.34■□□□□ 0.53
LRRK1-211ENST00000538064 NSUN4Q96CB9 384 aaKnown RBP18.34■□□□□ 0.53
LRRK1-211ENST00000538064 RBBP6Q7Z6E9 1792 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms