RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ANTXR1Q9H6X2 564 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 ATG3Q9NT62 314 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 CPSF2Q9P2I0 782 aaKnown RBP6.1□□□□□ -1.43
SNHG1-201ENST00000535076 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 ODF2LQ9ULJ1 636 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 SPAG9O60271 1321 aaKnown RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 CFAP69A5D8W1 941 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 NEURL1BA8MQ27 555 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 PPP1R12BO60237 982 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 GDF11O95390 407 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 CCDC159P0C7I6 412 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 HARSP12081 509 aaKnown RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 STIP1P31948 543 aaKnown RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 RDXP35241 583 aaKnown RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 RPS6KA3P51812 740 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 SEC13P55735 322 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 CCDC15Q0P6D6 951 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 GRIK3Q13003 919 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 TBC1D25Q3MII6 688 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 CCDC178Q5BJE1 867 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 SLCO4C1Q6ZQN7 724 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 SDCCAG8Q86SQ7 713 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 ANKMY2Q8IV38 441 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 PDILTQ8N807 584 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 GALNT6Q8NCL4 622 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 SCG3Q8WXD2 468 aaKnown RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 PPM1EQ8WY54 764 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 MIEF2Q96C03 454 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 FAXDC2Q96IV6 333 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 CRACR2AQ9BSW2 395 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 C2orf49Q9BVC5 232 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 RWDD1Q9H446 243 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 CTNNA3Q9UI47 895 aa6.09□□□□□ -1.43
SNHG1-201ENST00000535076 NSFL1CQ9UNZ2 370 aaKnown RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 V9GYY5 206 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-201ENST00000535076 UHRF1BP1LA0JNW5 1464 aa6.09□□□□□ -1.44
SNHG1-201ENST00000535076 ATAD2Q6PL18 1390 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 SHTN1A0MZ66 631 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 FAM196BA6NMK8 535 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 ERLIN1O75477 346 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 SMC2O95347 1197 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 ARAFP10398 606 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 EPXP11678 715 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 CHMLP26374 656 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 GYS2P54840 703 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 HNRNPUQ00839 825 aaKnown RBP eCLIP6.08□□□□□ -1.44
SNHG1-201ENST00000535076 DEUP1Q05D60 604 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 TMEM151AQ8N4L1 468 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 CCDC82Q8N4S0 544 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 NEDD1Q8NHV4 660 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 EDARADDQ8WWZ3 215 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 PLEKHG4BQ96PX9 1271 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 FMNL2Q96PY5 1086 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 SLC30A3Q99726 388 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 LRRC4BQ9NT99 713 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 SPATS2LQ9NUQ6 558 aaKnown RBP6.08□□□□□ -1.44
SNHG1-201ENST00000535076 POLKQ9UBT6 870 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 PUF60Q9UHX1 559 aaKnown RBP6.08□□□□□ -1.44
SNHG1-201ENST00000535076 CTDP1Q9Y5B0 961 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-201ENST00000535076 DNMT3AQ9Y6K1 912 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-201ENST00000535076 ARHGAP31Q2M1Z3 1444 aa6.08□□□□□ -1.44
SNHG1-201ENST00000535076 PLEKHG2Q9H7P9 1386 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 F8VZ95 297 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 PEX14O75381 377 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 PCBP4P57723 403 aaKnown RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 PSMD2Q13200 908 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 CRYMQ14894 314 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 COL19A1Q14993 1142 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 C4orf46Q504U0 113 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 FAM182BQ5T319 152 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 ACBD5Q5T8D3 534 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 MFSD4BQ5TF39 518 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 C1orf53Q5VUE5 145 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 LARP1Q6PKG0 1096 aaKnown RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 CCDC186Q7Z3E2 898 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 TEX11Q8IYF3 940 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 RHPN1Q8TCX5 695 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 SCARF2Q96GP6 870 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 MDFIQ99750 246 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 VRTNQ9H8Y1 702 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 QPCTLQ9NXS2 382 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 TMOD4Q9NZQ9 345 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 GDF2Q9UK05 429 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 FBXO9Q9UK97 447 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 BARX2Q9UMQ3 279 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 ATP8A1Q9Y2Q0 1164 aa6.07□□□□□ -1.44
SNHG1-201ENST00000535076 RSF1Q96T23 1441 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-201ENST00000535076 FOSL1P15407 271 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 RPL17P18621 184 aaKnown RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 RFX1P22670 979 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 COL8A1P27658 744 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 GRNP28799 593 aaKnown RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-201ENST00000535076 GPS2Q13227 327 aa6.06□□□□□ -1.44
SNHG1-201ENST00000535076 KRT72Q14CN4 511 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms