RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 STRIP1Q5VSL9 837 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 CST9Q5W186 159 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 VPS37DQ86XT2 251 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 RIPOR2Q9Y4F9 1068 aa11.15□□□□□ -0.62
CCDC90B-219ENST00000534753 CNTNAP1P78357 1384 aa11.15□□□□□ -0.63
CCDC90B-219ENST00000534753 SNPHO15079 494 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 SASH1O94885 1247 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 TRIM27P14373 513 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 HIBADHP31937 336 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 ZNF280AP59817 542 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 NBPF9Q3BBW0 867 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 JMYQ8N9B5 988 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 ARHGAP45Q92619 1136 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 KCNK17Q96T54 332 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 GMLQ99445 158 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 PGAP2Q9UHJ9 254 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 HDAC9Q9UKV0 1011 aa11.14□□□□□ -0.63
CCDC90B-219ENST00000534753 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 MYO3BQ8WXR4 1341 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 RBM5P52756 815 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 UBE4AQ14139 1066 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 ZKSCAN2Q63HK3 967 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 NUDT18Q6ZVK8 323 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 SPNS2Q8IVW8 549 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 PA2G4Q9UQ80 394 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
CCDC90B-219ENST00000534753 EYA2O00167 538 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 SMAPO00193 183 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 PDE8BO95263 885 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 GNAI3P08754 354 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 IL1R1P14778 569 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 CAVIN4Q5BKX8 364 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 PRAMEF18Q5VWM3 479 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 FTSJ3Q8IY81 847 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 FAM84BQ96KN1 310 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 CAPNS2Q96L46 248 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
CCDC90B-219ENST00000534753 WDR33Q9C0J8 1336 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 IRS2Q9Y4H2 1338 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 RASSF10A6NK89 507 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 SRGAP3O43295 1099 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 IFIT1P09914 478 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 RFX5P48382 616 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 BCAMP50895 628 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 HUNKP57058 714 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 PTPN12Q05209 780 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 DLGAP5Q15398 846 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 CERS5Q8N5B7 392 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 C2orf69Q8N8R5 385 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 PSME4Q14997 1843 aa11.11□□□□□ -0.63
CCDC90B-219ENST00000534753 TRPM7Q96QT4 1865 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 WNT10BO00744 389 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 AOC2O75106 756 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 GNAI2P04899 355 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 SLC5A1P13866 664 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 ECE1P42892 770 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 PRKG1Q13976 671 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 PUM3Q15397 648 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 MFSD14BQ5SR56 506 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 ITPRIPQ8IWB1 547 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 AIDAQ96BJ3 306 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 GBA2Q9HCG7 927 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 PCDHAC2Q9Y5I4 1007 aa11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-219ENST00000534753 CLRN2A0PK11 232 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 PSEN2P49810 448 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 CFAP100Q494V2 611 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 ATG9AQ7Z3C6 839 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 DZIP1LQ8IYY4 767 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 VGLL2Q8N8G2 317 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 TDRD7Q8NHU6 1098 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-219ENST00000534753 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
CCDC90B-219ENST00000534753 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
CCDC90B-219ENST00000534753 TATDN2Q93075 761 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms