RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CNNM1Q9NRU3 951 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 SNAP23O00161 211 aa22.31■■□□□ 1.16
CAPN1-226ENST00000533820 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-226ENST00000533820 EVCP57679 992 aa22.31■■□□□ 1.16
CAPN1-226ENST00000533820 SLC20A2Q08357 652 aa22.31■■□□□ 1.16
CAPN1-226ENST00000533820 CAMTA1Q9Y6Y1 1673 aa22.31■■□□□ 1.16
CAPN1-226ENST00000533820 MYH15Q9Y2K3 1946 aa22.31■■□□□ 1.16
CAPN1-226ENST00000533820 TRPM3Q9HCF6 1732 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-226ENST00000533820 TOMM22Q9NS69 142 aa22.31■■□□□ 1.16
CAPN1-226ENST00000533820 FOXN1O15353 648 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 ZFYP08048 801 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-226ENST00000533820 CMA1P23946 247 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 TCIRG1Q13488 830 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 SYCP1Q15431 976 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 SHC4Q6S5L8 630 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 UBASH3AP57075 661 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 ZNF397Q8NF99 534 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-226ENST00000533820 GREM2Q9H772 168 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 DNAI1Q9UI46 699 aa22.3■■□□□ 1.16
CAPN1-226ENST00000533820 ANGEL1Q9UNK9 670 aaKnown RBP22.3■■□□□ 1.16
CAPN1-226ENST00000533820 TMEM232C9JQI7 657 aa22.29■■□□□ 1.16
CAPN1-226ENST00000533820 SLC39A14Q15043 492 aa22.29■■□□□ 1.16
CAPN1-226ENST00000533820 DNAJC10Q8IXB1 793 aa22.29■■□□□ 1.16
CAPN1-226ENST00000533820 CMTR1Q8N1G2 835 aaKnown RBP22.29■■□□□ 1.16
CAPN1-226ENST00000533820 RRP12Q5JTH9 1297 aaKnown RBP22.29■■□□□ 1.16
CAPN1-226ENST00000533820 ERO1AQ96HE7 468 aa22.29■■□□□ 1.16
CAPN1-226ENST00000533820 PIH1D3Q9NQM4 214 aaKnown RBP22.29■■□□□ 1.16
CAPN1-226ENST00000533820 KCNG1Q9UIX4 513 aa22.29■■□□□ 1.16
CAPN1-226ENST00000533820 GABPB1Q06547 395 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-226ENST00000533820 ZKSCAN3Q9BRR0 538 aa22.28■■□□□ 1.16
CAPN1-226ENST00000533820 ITGA6P23229 1130 aa22.28■■□□□ 1.16
CAPN1-226ENST00000533820 CCDC150Q8NCX0 1101 aa22.28■■□□□ 1.16
CAPN1-226ENST00000533820 UTP14AQ9BVJ6 771 aaKnown RBP22.28■■□□□ 1.16
CAPN1-226ENST00000533820 IMPACTQ9P2X3 320 aa22.28■■□□□ 1.16
CAPN1-226ENST00000533820 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
CAPN1-226ENST00000533820 TNNT3P45378 269 aaPredicted RBP22.27■■□□□ 1.16
CAPN1-226ENST00000533820 CTDSPL2Q05D32 466 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 LONRF3Q496Y0 759 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 APOA5Q6Q788 366 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 ISCA1Q9BUE6 129 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 SLC26A6Q9BXS9 759 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 FANCLQ9NW38 375 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 ASAP1Q9ULH1 1129 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 ZNF532Q9HCE3 1301 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 HLFQ16534 295 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.27■■□□□ 1.167e-7■■■■□ 19.9
CAPN1-226ENST00000533820 HSD3B7Q9H2F3 369 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 PCDH11XQ9BZA7 1347 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 PCDH11YQ9BZA8 1340 aa22.27■■□□□ 1.16
CAPN1-226ENST00000533820 ZNF827Q17R98 1081 aa22.27■■□□□ 1.15
CAPN1-226ENST00000533820 PDILTQ8N807 584 aa22.27■■□□□ 1.15
CAPN1-226ENST00000533820 PHKA1P46020 1223 aa22.26■■□□□ 1.15
CAPN1-226ENST00000533820 GOLGA8AA7E2F4 631 aa22.26■■□□□ 1.15
CAPN1-226ENST00000533820 NRDCO43847 1150 aa22.26■■□□□ 1.15
CAPN1-226ENST00000533820 IARSP41252 1262 aaKnown RBP22.26■■□□□ 1.15
CAPN1-226ENST00000533820 ATG3Q9NT62 314 aa22.26■■□□□ 1.15
CAPN1-226ENST00000533820 ZBTB43O43298 467 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 TRIM29Q14134 588 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 TERF2Q15554 542 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 TMEM67Q5HYA8 995 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 KIF6Q6ZMV9 814 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 FOXP4Q8IVH2 680 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-226ENST00000533820 CNNM3Q8NE01 707 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 KCNJ14Q9UNX9 436 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 NWD2Q9ULI1 1742 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 PCDHA5Q9Y5H7 936 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 ZMYM6O95789 1325 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 RANBP6O60518 1105 aaKnown RBP22.25■■□□□ 1.15
CAPN1-226ENST00000533820 ADD2P35612 726 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 GRIN1Q05586 938 aa22.25■■□□□ 1.15
CAPN1-226ENST00000533820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.25■■□□□ 1.15
CAPN1-226ENST00000533820 URI1O94763 535 aaPredicted RBP22.24■■□□□ 1.15
CAPN1-226ENST00000533820 PDE4BQ07343 736 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 GRAMD1CQ8IYS0 662 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 ABCC6O95255 1503 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 SH2B2O14492 632 aaPredicted RBP22.24■■□□□ 1.15
CAPN1-226ENST00000533820 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 MYL5Q02045 173 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 CPLX2Q6PUV4 134 aaKnown RBP22.24■■□□□ 1.15
CAPN1-226ENST00000533820 METTL16Q86W50 562 aaKnown RBP22.24■■□□□ 1.15
CAPN1-226ENST00000533820 TRMT44Q8IYL2 757 aaKnown RBP22.24■■□□□ 1.15
CAPN1-226ENST00000533820 KRT222Q8N1A0 295 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 FBXL16Q8N461 479 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 AIDAQ96BJ3 306 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 ZNF446Q9NWS9 450 aa22.24■■□□□ 1.15
CAPN1-226ENST00000533820 LOC102724159A0A0B4J2E5 919 aa22.23■■□□□ 1.15
CAPN1-226ENST00000533820 PWP2Q15269 919 aaKnown RBP22.23■■□□□ 1.15
CAPN1-226ENST00000533820 BPIFA3Q9BQP9 254 aa22.23■■□□□ 1.15
CAPN1-226ENST00000533820 EPC1Q9H2F5 836 aa22.23■■□□□ 1.15
CAPN1-226ENST00000533820 MORC2Q9Y6X9 1032 aaPredicted RBP22.23■■□□□ 1.15
CAPN1-226ENST00000533820 BTBD18B2RXH4 712 aa22.23■■□□□ 1.15
CAPN1-226ENST00000533820 ARHGAP29Q52LW3 1261 aa22.23■■□□□ 1.15
CAPN1-226ENST00000533820 TMOD3Q9NYL9 352 aa22.23■■□□□ 1.15
CAPN1-226ENST00000533820 ERVV-2B6SEH9 535 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 IFIT3O14879 490 aaKnown RBP22.22■■□□□ 1.15
CAPN1-226ENST00000533820 PRR29P0C7W0 189 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 PTPAQ15257 358 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 OLFM4Q6UX06 510 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 KCNH3Q9ULD8 1083 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms