RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 LRP5O75197 1615 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 ZNF609O15014 1411 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 SH3TC1Q8TE82 1336 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 CDHR2Q9BYE9 1310 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 STARD3NLO95772 234 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 MBD3O95983 291 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 ZKSCAN1P17029 563 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 PSMA5P28066 241 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 SSFA2P28290 1259 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 IL15P40933 162 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 KRT32Q14532 448 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 NECTIN1Q15223 517 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 ANKRD1Q15327 319 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 TNNI3KQ59H18 835 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 VPS53Q5VIR6 699 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 USPL1Q5W0Q7 1092 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 UBE3BQ7Z3V4 1068 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 SH3RF1Q7Z6J0 888 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 MAP4K1Q92918 833 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 TMOD3Q9NYL9 352 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 PALD1Q9ULE6 856 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 FPGT-TNNI3KV9GXZ4 949 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 LAMB2P55268 1798 aa6.85□□□□□ -1.31
ATPAF1-210ENST00000532925 DOT1LQ8TEK3 1739 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 MYH7P12883 1935 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 WDR33Q9C0J8 1336 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 MAGEB6P1A0A0J9YX57 407 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 NUTM2BA6NNL0 878 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 NUTM2EB1AL46 878 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 PCCAP05165 728 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 EVA1CP58658 441 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 ZNF445P59923 1031 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 FOXO4P98177 505 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 TCIRG1Q13488 830 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 LRRFIP1Q32MZ4 808 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 EPHA10Q5JZY3 1008 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 MYSM1Q5VVJ2 828 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 CWC27Q6UX04 472 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 VASH1Q7L8A9 365 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 NUTM2AQ8IVF1 878 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 HAUS7Q99871 368 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 IL25Q9H293 177 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 LIMCH1Q9UPQ0 1083 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 NUP98P52948 1817 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 PHLPP1O60346 1717 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 ARAP2Q8WZ64 1704 aa6.84□□□□□ -1.31
ATPAF1-210ENST00000532925 MAP3K15Q6ZN16 1313 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 ERVV-1B6SEH8 477 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 KRT76Q01546 638 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 KIF6Q6ZMV9 814 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 SH3BP5LQ7L8J4 393 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 ZGPATQ8N5A5 531 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 GPR161Q8N6U8 529 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 KBTBD3Q8NAB2 608 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 AK7Q96M32 723 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 FSD1Q9BTV5 496 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 LMBRD1Q9NUN5 540 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 DBNLQ9UJU6 430 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 AKAP2Q9Y2D5 859 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 ATP6V1DQ9Y5K8 247 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 CYP46A1Q9Y6A2 500 aa6.83□□□□□ -1.32
ATPAF1-210ENST00000532925 EYA2O00167 538 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 LILRB3O75022 631 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 CSF1RP07333 972 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 GSK3AP49840 483 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 CREB3L3Q68CJ9 461 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 LMBR1LQ6UX01 489 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 TTLL7Q6ZT98 887 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 RUFY3Q7L099 469 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 ATG9AQ7Z3C6 839 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 TRMT44Q8IYL2 757 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 CCDC116Q8IYX3 515 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 ZBTB38Q8NAP3 1195 aaPredicted RBP6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 ARMC2Q8NEN0 867 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 CHMP4CQ96CF2 233 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 CCDC8Q9H0W5 538 aaPredicted RBP6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 BCL11AQ9H165 835 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 HELLSQ9NRZ9 838 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 ZDHHC9Q9Y397 364 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 MAP4K5Q9Y4K4 846 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 RBM8AQ9Y5S9 174 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 DDX49Q9Y6V7 483 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 BCORQ6W2J9 1755 aa6.82□□□□□ -1.32
ATPAF1-210ENST00000532925 SLIT2O94813 1529 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 A0A0D9SFI3 127 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 SLC27A2O14975 620 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 A1BGP04217 495 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 ZFYP08048 801 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 HMGB1P09429 215 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 HSP90B1P14625 803 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 CASTP20810 708 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 PDCP20941 246 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 IL6STP40189 918 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 AK2P54819 239 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms