RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 SBF2Q86WG5 1849 aa20.89■□□□□ 0.94
UBXN1-213ENST00000532904 PTPN14Q15678 1187 aa20.89■□□□□ 0.93
UBXN1-213ENST00000532904 ADALQ6DHV7 355 aa20.89■□□□□ 0.93
UBXN1-213ENST00000532904 AOPEPQ8N6M6 819 aa20.89■□□□□ 0.93
UBXN1-213ENST00000532904 LY75O60449 1722 aa20.89■□□□□ 0.93
UBXN1-213ENST00000532904 FDPSP14324 419 aaKnown RBP20.89■□□□□ 0.93
UBXN1-213ENST00000532904 GUCY1B3Q02153 619 aa20.89■□□□□ 0.93
UBXN1-213ENST00000532904 A0A087WWV3 80 aa20.88■□□□□ 0.93
UBXN1-213ENST00000532904 FGFR2P21802 821 aa20.88■□□□□ 0.93
UBXN1-213ENST00000532904 GSDMDP57764 484 aa20.88■□□□□ 0.93
UBXN1-213ENST00000532904 FKBP4Q02790 459 aaKnown RBP eCLIP20.88■□□□□ 0.93
UBXN1-213ENST00000532904 PUM3Q15397 648 aaKnown RBP20.88■□□□□ 0.93
UBXN1-213ENST00000532904 GJD4Q96KN9 370 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-213ENST00000532904 ONECUT3O60422 494 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-213ENST00000532904 FILIP1Q7Z7B0 1213 aa20.87■□□□□ 0.93
UBXN1-213ENST00000532904 LPIN2Q92539 896 aa20.87■□□□□ 0.93
UBXN1-213ENST00000532904 ZNF592Q92610 1267 aa20.87■□□□□ 0.93
UBXN1-213ENST00000532904 NAP1L2Q9ULW6 460 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-213ENST00000532904 TAF1LQ8IZX4 1826 aa20.87■□□□□ 0.93
UBXN1-213ENST00000532904 NAA30Q147X3 362 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-213ENST00000532904 CCAR2Q8N163 923 aaKnown RBP20.87■□□□□ 0.93
UBXN1-213ENST00000532904 BPIFA3Q9BQP9 254 aa20.87■□□□□ 0.93
UBXN1-213ENST00000532904 OSBPL5Q9H0X9 879 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-213ENST00000532904 IMPACTQ9P2X3 320 aa20.87■□□□□ 0.93
UBXN1-213ENST00000532904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-213ENST00000532904 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
UBXN1-213ENST00000532904 UQCRFS1P1P0C7P4 283 aa20.86■□□□□ 0.93
UBXN1-213ENST00000532904 ARID4AP29374 1257 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-213ENST00000532904 LINC00301Q8NCQ3 95 aa20.86■□□□□ 0.93
UBXN1-213ENST00000532904 ATRNO75882 1429 aa20.86■□□□□ 0.93
UBXN1-213ENST00000532904 SCARF1Q14162 830 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 TTF1Q15361 905 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-213ENST00000532904 MEX3CQ5U5Q3 659 aaKnown RBP20.85■□□□□ 0.93
UBXN1-213ENST00000532904 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 NBPF11Q86T75 865 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 ZHX1Q9UKY1 873 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-213ENST00000532904 M0R2C6 588 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 ZAP70P43403 619 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 MPHOSPH8Q99549 860 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 SDF4Q9BRK5 362 aa20.85■□□□□ 0.93
UBXN1-213ENST00000532904 DDX41Q9UJV9 622 aaKnown RBP20.85■□□□□ 0.93
UBXN1-213ENST00000532904 YEATS4O95619 227 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 MCAMP43121 646 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 NDUFA8P51970 172 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 KCNG4Q8TDN1 519 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 ERCC4Q92889 916 aaPredicted RBP20.84■□□□□ 0.93
UBXN1-213ENST00000532904 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.84■□□□□ 0.93
UBXN1-213ENST00000532904 KIAA1468Q9P260 1216 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 COL24A1Q17RW2 1714 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 CASZ1Q86V15 1759 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 A0A1B0GVL5 298 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 KIF2AO00139 706 aaPredicted RBP20.84■□□□□ 0.93
UBXN1-213ENST00000532904 PPFIA3O75145 1194 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 SLC5A1P13866 664 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 IGHMBP2P38935 993 aaKnown RBP20.84■□□□□ 0.93
UBXN1-213ENST00000532904 TTLL5Q6EMB2 1281 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 PTF1AQ7RTS3 328 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 APPBP2Q92624 585 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 NARFQ9UHQ1 456 aa20.84■□□□□ 0.93
UBXN1-213ENST00000532904 AFF2P51816 1311 aa20.83■□□□□ 0.93
UBXN1-213ENST00000532904 KIF20AO95235 890 aa20.83■□□□□ 0.93
UBXN1-213ENST00000532904 OSBP2Q969R2 916 aa20.83■□□□□ 0.93
UBXN1-213ENST00000532904 CLIC4Q9Y696 253 aa20.83■□□□□ 0.93
UBXN1-213ENST00000532904 NEDD4P46934 1319 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 STK38Q15208 465 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 SF3B3Q15393 1217 aaKnown RBP20.82■□□□□ 0.92
UBXN1-213ENST00000532904 CCDC102BQ68D86 513 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 ZNF215Q9UL58 517 aaPredicted RBP20.82■□□□□ 0.92
UBXN1-213ENST00000532904 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 BRAPQ7Z569 592 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 KIF18AQ8NI77 898 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 ERO1AQ96HE7 468 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 C8orf76Q96K31 380 aa20.82■□□□□ 0.92
UBXN1-213ENST00000532904 CDC5LQ99459 802 aaKnown RBP20.82■□□□□ 0.92
UBXN1-213ENST00000532904 TRMT1Q9NXH9 659 aaKnown RBP20.82■□□□□ 0.92
UBXN1-213ENST00000532904 TRPC5Q9UL62 973 aaPredicted RBP20.82■□□□□ 0.92
UBXN1-213ENST00000532904 MORC2Q9Y6X9 1032 aaPredicted RBP20.82■□□□□ 0.92
UBXN1-213ENST00000532904 DHX16O60231 1041 aaKnown RBP20.81■□□□□ 0.92
UBXN1-213ENST00000532904 HSPA1LP34931 641 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 SF3A1Q15459 793 aaKnown RBP20.81■□□□□ 0.92
UBXN1-213ENST00000532904 DPCR1Q3MIW9 517 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 ZNF397Q8NF99 534 aaPredicted RBP20.81■□□□□ 0.92
UBXN1-213ENST00000532904 GPHNQ9NQX3 736 aaPredicted RBP20.81■□□□□ 0.92
UBXN1-213ENST00000532904 CCNL1Q9UK58 526 aaPredicted RBP20.81■□□□□ 0.92
UBXN1-213ENST00000532904 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 SPTLC2O15270 562 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 OTUD7BQ6GQQ9 843 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 CCDC150Q8NCX0 1101 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 FBXO18Q8NFZ0 1043 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 FBXW7Q969H0 707 aa20.81■□□□□ 0.92
UBXN1-213ENST00000532904 FOXP2O15409 715 aa20.8■□□□□ 0.92
UBXN1-213ENST00000532904 ZRSR1Q15695 479 aaKnown RBP20.8■□□□□ 0.92
UBXN1-213ENST00000532904 MYSM1Q5VVJ2 828 aa20.8■□□□□ 0.92
UBXN1-213ENST00000532904 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
UBXN1-213ENST00000532904 HPS5Q9UPZ3 1129 aa20.8■□□□□ 0.92
UBXN1-213ENST00000532904 A0A1B0GUL6 1792 aa20.8■□□□□ 0.92
UBXN1-213ENST00000532904 PHKA1P46020 1223 aa20.79■□□□□ 0.92
UBXN1-213ENST00000532904 KCNJ6P48051 423 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms