RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 C1orf115Q9H7X2 142 aa28.48■■■□□ 2.15
LTBP3-220ENST00000532661 OTOFQ9HC10 1997 aa28.48■■■□□ 2.15
LTBP3-220ENST00000532661 TCP10Q12799 353 aa28.47■■■□□ 2.15
LTBP3-220ENST00000532661 NFIAQ12857 509 aa28.47■■■□□ 2.15
LTBP3-220ENST00000532661 G3BP1Q13283 466 aaKnown RBP eCLIP28.47■■■□□ 2.15
LTBP3-220ENST00000532661 NOM1Q5C9Z4 860 aaKnown RBP28.47■■■□□ 2.15
LTBP3-220ENST00000532661 PTPN18Q99952 460 aa28.47■■■□□ 2.15
LTBP3-220ENST00000532661 USP40Q9NVE5 1235 aa28.47■■■□□ 2.15
LTBP3-220ENST00000532661 MVPQ14764 893 aaKnown RBP28.46■■■□□ 2.15
LTBP3-220ENST00000532661 FTSJ3Q8IY81 847 aaKnown RBP28.46■■■□□ 2.15
LTBP3-220ENST00000532661 FAM151AQ8WW52 585 aa28.46■■■□□ 2.15
LTBP3-220ENST00000532661 ABCF2Q9UG63 623 aa28.46■■■□□ 2.15
LTBP3-220ENST00000532661 TESPA1A2RU30 521 aaPredicted RBP28.45■■■□□ 2.14
LTBP3-220ENST00000532661 MIGA2Q7L4E1 593 aa28.45■■■□□ 2.14
LTBP3-220ENST00000532661 ZKSCAN4Q969J2 545 aaPredicted RBP28.45■■■□□ 2.14
LTBP3-220ENST00000532661 MS4A4AQ96JQ5 239 aa28.45■■■□□ 2.14
LTBP3-220ENST00000532661 FAM198AQ9UFP1 575 aa28.45■■■□□ 2.14
LTBP3-220ENST00000532661 CSADQ9Y600 493 aa28.45■■■□□ 2.14
LTBP3-220ENST00000532661 FKTNO75072 461 aa28.44■■■□□ 2.14
LTBP3-220ENST00000532661 POLA2Q14181 598 aa28.44■■■□□ 2.14
LTBP3-220ENST00000532661 ITPRIPQ8IWB1 547 aa28.44■■■□□ 2.14
LTBP3-220ENST00000532661 ZGPATQ8N5A5 531 aaKnown RBP28.44■■■□□ 2.14
LTBP3-220ENST00000532661 WRNIP1Q96S55 665 aa28.44■■■□□ 2.14
LTBP3-220ENST00000532661 SNCAIPQ9Y6H5 919 aa28.44■■■□□ 2.14
LTBP3-220ENST00000532661 PDS5AQ29RF7 1337 aaKnown RBP28.43■■■□□ 2.14
LTBP3-220ENST00000532661 RPAP1Q9BWH6 1393 aaPredicted RBP28.43■■■□□ 2.14
LTBP3-220ENST00000532661 ZBTB7BO15156 539 aaPredicted RBP28.43■■■□□ 2.14
LTBP3-220ENST00000532661 ATP8B2P98198 1209 aa28.43■■■□□ 2.14
LTBP3-220ENST00000532661 PI16Q6UXB8 463 aa28.43■■■□□ 2.14
LTBP3-220ENST00000532661 ZFPM1Q8IX07 1006 aa28.43■■■□□ 2.14
LTBP3-220ENST00000532661 OTUD5Q96G74 571 aa28.43■■■□□ 2.14
LTBP3-220ENST00000532661 HMG20BQ9P0W2 317 aa28.43■■■□□ 2.14
LTBP3-220ENST00000532661 GORABQ5T7V8 394 aa28.42■■■□□ 2.14
LTBP3-220ENST00000532661 DZIP1Q86YF9 867 aaKnown RBP28.42■■■□□ 2.14
LTBP3-220ENST00000532661 SSH3Q8TE77 659 aa28.42■■■□□ 2.14
LTBP3-220ENST00000532661 BRI3BPQ8WY22 251 aa28.42■■■□□ 2.14
LTBP3-220ENST00000532661 HOOK2Q96ED9 719 aa28.42■■■□□ 2.14
LTBP3-220ENST00000532661 GAKO14976 1311 aa28.42■■■□□ 2.14
LTBP3-220ENST00000532661 SPDYE5A6NIY4 337 aa28.4■■■□□ 2.14
LTBP3-220ENST00000532661 RGS19P49795 217 aa28.4■■■□□ 2.14
LTBP3-220ENST00000532661 CRHR2Q13324 411 aa28.4■■■□□ 2.14
LTBP3-220ENST00000532661 DCAF15Q66K64 600 aa28.4■■■□□ 2.14
LTBP3-220ENST00000532661 OTUD7BQ6GQQ9 843 aa28.4■■■□□ 2.14
LTBP3-220ENST00000532661 ZNF341Q9BYN7 854 aa28.4■■■□□ 2.14
LTBP3-220ENST00000532661 INPP5BP32019 993 aa28.39■■■□□ 2.14
LTBP3-220ENST00000532661 SPTY2D1Q68D10 685 aaPredicted RBP28.39■■■□□ 2.14
LTBP3-220ENST00000532661 TBC1D9Q6ZT07 1266 aa28.39■■■□□ 2.14
LTBP3-220ENST00000532661 SPATA5Q8NB90 893 aa28.39■■■□□ 2.14
LTBP3-220ENST00000532661 HPS5Q9UPZ3 1129 aa28.39■■■□□ 2.14
LTBP3-220ENST00000532661 LAMB1P07942 1786 aa28.39■■■□□ 2.13
LTBP3-220ENST00000532661 CCL15-CCL14A0A0B4J2E2 113 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 GTF2A2P52657 109 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 MECOMQ03112 1051 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 CCL15Q16663 113 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 ERICH6Q7L0X2 663 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 PANK1Q8TE04 598 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 ZNF384Q8TF68 577 aa28.38■■■□□ 2.13
LTBP3-220ENST00000532661 FAM163AQ96GL9 167 aaPredicted RBP28.38■■■□□ 2.13
LTBP3-220ENST00000532661 SURF6O75683 361 aaKnown RBP28.37■■■□□ 2.13
LTBP3-220ENST00000532661 ARID4AP29374 1257 aaPredicted RBP28.37■■■□□ 2.13
LTBP3-220ENST00000532661 BTDP43251 543 aa28.37■■■□□ 2.13
LTBP3-220ENST00000532661 RGS3P49796 1198 aa28.37■■■□□ 2.13
LTBP3-220ENST00000532661 OS9Q13438 667 aaPredicted RBP28.37■■■□□ 2.13
LTBP3-220ENST00000532661 PKN2Q16513 984 aaKnown RBP28.37■■■□□ 2.13
LTBP3-220ENST00000532661 ERO1BQ86YB8 467 aa28.37■■■□□ 2.13
LTBP3-220ENST00000532661 MCAMP43121 646 aa28.36■■■□□ 2.13
LTBP3-220ENST00000532661 IDI2Q9BXS1 227 aa28.36■■■□□ 2.13
LTBP3-220ENST00000532661 IRF6O14896 467 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 SOX10P56693 466 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 TNNI3KQ59H18 835 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 SLF2Q8IX21 1173 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 FAM43AQ8N2R8 423 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 DBNDD2Q9BQY9 259 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 GPR108Q9NPR9 543 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 ZNF112Q9UJU3 913 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 FPGT-TNNI3KV9GXZ4 949 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 MROH7-TTC4A0A0A0MT08 1334 aa28.35■■■□□ 2.13
LTBP3-220ENST00000532661 SH3BP5LQ7L8J4 393 aa28.34■■■□□ 2.13
LTBP3-220ENST00000532661 DDX4Q9NQI0 724 aaKnown RBP28.34■■■□□ 2.13
LTBP3-220ENST00000532661 RFX7Q2KHR2 1363 aa28.34■■■□□ 2.13
LTBP3-220ENST00000532661 MYH2Q9UKX2 1941 aa28.33■■■□□ 2.13
LTBP3-220ENST00000532661 ENTPD3O75355 529 aa28.33■■■□□ 2.13
LTBP3-220ENST00000532661 WDHD1O75717 1129 aaPredicted RBP28.33■■■□□ 2.13
LTBP3-220ENST00000532661 UQCRFS1P1P0C7P4 283 aa28.33■■■□□ 2.13
LTBP3-220ENST00000532661 MLLT1Q03111 559 aaPredicted RBP28.33■■■□□ 2.13
LTBP3-220ENST00000532661 FBXO46Q6PJ61 603 aaPredicted RBP28.33■■■□□ 2.13
LTBP3-220ENST00000532661 SNRKQ9NRH2 765 aa28.33■■■□□ 2.13
LTBP3-220ENST00000532661 NOP58Q9Y2X3 529 aaKnown RBP28.33■■■□□ 2.13
LTBP3-220ENST00000532661 GPR75-ASB3A0A0A6YYF3 556 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 SLURP2P0DP57 97 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 PPIL2Q13356 520 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 PICALMQ13492 652 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 CEP85Q6P2H3 762 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 CD99L2Q8TCZ2 262 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 NSUN4Q96CB9 384 aaKnown RBP28.32■■■□□ 2.12
LTBP3-220ENST00000532661 RAI14Q9P0K7 980 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 TRIM17Q9Y577 477 aa28.32■■■□□ 2.12
LTBP3-220ENST00000532661 CETPP11597 493 aa28.31■■■□□ 2.12
LTBP3-220ENST00000532661 RHBDL3P58872 404 aa28.31■■■□□ 2.12
LTBP3-220ENST00000532661 CAP1Q01518 475 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms