RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 IL2RAP01589 272 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 NPR1P16066 1061 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 CTCFP49711 727 aaPredicted RBP11.02□□□□□ -0.65
CDC27-208ENST00000532575 SCNN1DP51172 638 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 CLDN10P78369 228 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 CLN3Q13286 438 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 CCDC93Q567U6 631 aa11.02□□□□□ -0.65
CDC27-208ENST00000532575 NBPF5PQ86XG9 351 aaPredicted RBP11.02□□□□□ -0.65
CDC27-208ENST00000532575 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
CDC27-208ENST00000532575 TTLL8A6PVC2 850 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 BTBD11A6QL63 1104 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 U2SURPO15042 1029 aaKnown RBP11.01□□□□□ -0.65
CDC27-208ENST00000532575 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
CDC27-208ENST00000532575 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
CDC27-208ENST00000532575 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
CDC27-208ENST00000532575 ZNF787Q6DD87 383 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 TPTE2Q6XPS3 522 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
CDC27-208ENST00000532575 RTKN2Q8IZC4 609 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 OGFOD1Q8N543 542 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 KIAA1024Q9UPX6 916 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 PASKQ96RG2 1323 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
CDC27-208ENST00000532575 FOXN1O15353 648 aa11□□□□□ -0.65
CDC27-208ENST00000532575 ATP1A2P50993 1020 aa11□□□□□ -0.65
CDC27-208ENST00000532575 GDF10P55107 478 aa11□□□□□ -0.65
CDC27-208ENST00000532575 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
CDC27-208ENST00000532575 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
CDC27-208ENST00000532575 XAGE2Q96GT9 111 aa11□□□□□ -0.65
CDC27-208ENST00000532575 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
CDC27-208ENST00000532575 VRTNQ9H8Y1 702 aa11□□□□□ -0.65
CDC27-208ENST00000532575 DNAAF2Q9NVR5 837 aaKnown RBP11□□□□□ -0.65
CDC27-208ENST00000532575 HACL1Q9UJ83 578 aa11□□□□□ -0.65
CDC27-208ENST00000532575 KLRG2A4D1S0 409 aaPredicted RBP10.99□□□□□ -0.65
CDC27-208ENST00000532575 SOBPA7XYQ1 873 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 TMEM229AB2RXF0 380 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 RASA1P20936 1047 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 ALDH1B1P30837 517 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 VEGFBP49765 207 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
CDC27-208ENST00000532575 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 DNMT3LQ9UJW3 386 aa10.99□□□□□ -0.65
CDC27-208ENST00000532575 FER1L6Q2WGJ9 1857 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 FIGNL2A6NMB9 653 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 INHAP05111 366 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
CDC27-208ENST00000532575 EPHX2P34913 555 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 RNF217Q8TC41 542 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 RTF1Q92541 710 aaKnown RBP10.98□□□□□ -0.65
CDC27-208ENST00000532575 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 USP16Q9Y5T5 823 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 KIF7Q2M1P5 1343 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 CCDC88AQ3V6T2 1871 aa10.98□□□□□ -0.65
CDC27-208ENST00000532575 MAN1A2O60476 641 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 GTF2E1P29083 439 aaPredicted RBP10.97□□□□□ -0.65
CDC27-208ENST00000532575 GPC1P35052 558 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 RNF144AP50876 292 aaPredicted RBP10.97□□□□□ -0.65
CDC27-208ENST00000532575 MAP2K1Q02750 393 aaPredicted RBP10.97□□□□□ -0.65
CDC27-208ENST00000532575 DEFB115Q30KQ5 88 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 CRTC2Q53ET0 693 aaPredicted RBP10.97□□□□□ -0.65
CDC27-208ENST00000532575 CNTROBQ8N137 903 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 LARGE2Q8N3Y3 721 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 TPCN2Q8NHX9 752 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 JDP2Q8WYK2 163 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 ZNF594Q96JF6 807 aaPredicted RBP10.97□□□□□ -0.65
CDC27-208ENST00000532575 CFAP53Q96M91 514 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
CDC27-208ENST00000532575 NIP7Q9Y221 180 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDC27-208ENST00000532575 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
CDC27-208ENST00000532575 DICER1Q9UPY3 1922 aaKnown RBP10.96□□□□□ -0.65
CDC27-208ENST00000532575 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 SCN7AQ01118 1682 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 NPC1L1Q9UHC9 1359 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.96□□□□□ -0.65
CDC27-208ENST00000532575 RASSF10A6NK89 507 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 FZD9O00144 591 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 KCNQ3O43525 872 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.65
CDC27-208ENST00000532575 LBX1P52954 281 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 CCDC102BQ68D86 513 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 GPC2Q8N158 579 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 SYNE4Q8N205 404 aa10.96□□□□□ -0.65
CDC27-208ENST00000532575 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDC27-208ENST00000532575 ZNF541Q9H0D2 1346 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 DKK1O94907 266 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 PRKAR2BP31323 418 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
CDC27-208ENST00000532575 CENPCQ03188 943 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 PTK7Q13308 1070 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 SIX5Q8N196 739 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
CDC27-208ENST00000532575 PSMD1Q99460 953 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 NYXQ9GZU5 481 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 SERTAD1Q9UHV2 236 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
CDC27-208ENST00000532575 WDR33Q9C0J8 1336 aaKnown RBP10.94□□□□□ -0.66
CDC27-208ENST00000532575 SCN4AP35499 1836 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms