RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 COL13A1Q5TAT6 717 aaPredicted RBP28.2■■■□□ 2.1
CAPN1-222ENST00000532285 CDC42EP5Q6NZY7 148 aa28.2■■■□□ 2.1
CAPN1-222ENST00000532285 PI16Q6UXB8 463 aa28.2■■■□□ 2.1
CAPN1-222ENST00000532285 REM2Q8IYK8 340 aaPredicted RBP28.2■■■□□ 2.1
CAPN1-222ENST00000532285 EAF2Q96CJ1 260 aaPredicted RBP28.2■■■□□ 2.1
CAPN1-222ENST00000532285 IREB2P48200 963 aaKnown RBP28.19■■■□□ 2.1
CAPN1-222ENST00000532285 FAM163AQ96GL9 167 aaPredicted RBP28.19■■■□□ 2.1
CAPN1-222ENST00000532285 ZNF512BQ96KM6 892 aaPredicted RBP28.19■■■□□ 2.1
CAPN1-222ENST00000532285 CCDC8Q9H0W5 538 aaPredicted RBP28.19■■■□□ 2.1
CAPN1-222ENST00000532285 PRDM10Q9NQV6 1147 aa28.19■■■□□ 2.1
CAPN1-222ENST00000532285 DBNLQ9UJU6 430 aaKnown RBP28.19■■■□□ 2.1
CAPN1-222ENST00000532285 GAKO14976 1311 aa28.18■■■□□ 2.1
CAPN1-222ENST00000532285 USP2O75604 605 aaPredicted RBP28.18■■■□□ 2.1
CAPN1-222ENST00000532285 HSPA8P11142 646 aaKnown RBP28.18■■■□□ 2.1
CAPN1-222ENST00000532285 RHPN1Q8TCX5 695 aa28.18■■■□□ 2.1
CAPN1-222ENST00000532285 LBX1P52954 281 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 MECOMQ03112 1051 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 TBC1D9Q6ZT07 1266 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 SLC10A4Q96EP9 437 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 CSRNP1Q96S65 589 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 USP40Q9NVE5 1235 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 OTOFQ9HC10 1997 aa28.17■■■□□ 2.1
CAPN1-222ENST00000532285 CDAN1Q8IWY9 1227 aa28.16■■■□□ 2.1
CAPN1-222ENST00000532285 HOOK2Q96ED9 719 aa28.16■■■□□ 2.1
CAPN1-222ENST00000532285 KIF1BPQ96EK5 621 aa28.16■■■□□ 2.1
CAPN1-222ENST00000532285 TLR7Q9NYK1 1049 aaKnown RBP28.16■■■□□ 2.1
CAPN1-222ENST00000532285 MYO5AQ9Y4I1 1855 aaKnown RBP28.16■■■□□ 2.1
CAPN1-222ENST00000532285 RPAP1Q9BWH6 1393 aaPredicted RBP28.15■■■□□ 2.1
CAPN1-222ENST00000532285 RAB11FIP3O75154 756 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 GSTO1P78417 241 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 AACSQ86V21 672 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 FAM151AQ8WW52 585 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 SNRKQ9NRH2 765 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 LRP2BPQ9P2M1 347 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 MROH7-TTC4A0A0A0MT08 1334 aa28.15■■■□□ 2.1
CAPN1-222ENST00000532285 LDHCP07864 332 aa28.14■■■□□ 2.1
CAPN1-222ENST00000532285 ANKRD13AQ8IZ07 590 aa28.14■■■□□ 2.1
CAPN1-222ENST00000532285 NSUN4Q96CB9 384 aaKnown RBP28.14■■■□□ 2.1
CAPN1-222ENST00000532285 IL1RAPL2Q9NP60 686 aa28.14■■■□□ 2.1
CAPN1-222ENST00000532285 RAI14Q9P0K7 980 aa28.14■■■□□ 2.1
CAPN1-222ENST00000532285 RRP1P56182 461 aaKnown RBP28.13■■■□□ 2.09
CAPN1-222ENST00000532285 CLMNQ96JQ2 1002 aa28.13■■■□□ 2.09
CAPN1-222ENST00000532285 MAST2Q6P0Q8 1798 aa28.13■■■□□ 2.09
CAPN1-222ENST00000532285 LAMB1P07942 1786 aa28.12■■■□□ 2.09
CAPN1-222ENST00000532285 APBB1O00213 710 aa28.12■■■□□ 2.09
CAPN1-222ENST00000532285 SPRYD7Q5W111 196 aa28.12■■■□□ 2.09
CAPN1-222ENST00000532285 CLASRPQ8N2M8 674 aaKnown RBP28.12■■■□□ 2.09
CAPN1-222ENST00000532285 ZNF384Q8TF68 577 aa28.12■■■□□ 2.09
CAPN1-222ENST00000532285 SAGE1Q9NXZ1 904 aa28.12■■■□□ 2.09
CAPN1-222ENST00000532285 GPR75-ASB3A0A0A6YYF3 556 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 CYP2E1P05181 493 aaPredicted RBP28.11■■■□□ 2.09
CAPN1-222ENST00000532285 BTDP43251 543 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 TCP10Q12799 353 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 NFIAQ12857 509 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 IDI2Q9BXS1 227 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 FAM198AQ9UFP1 575 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 TSKSQ9UJT2 592 aa28.11■■■□□ 2.09
CAPN1-222ENST00000532285 IGSF3O75054 1194 aa28.1■■■□□ 2.09
CAPN1-222ENST00000532285 MKRN3Q13064 507 aaKnown RBP28.1■■■□□ 2.09
CAPN1-222ENST00000532285 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.1■■■□□ 2.09
CAPN1-222ENST00000532285 ZBTB48P10074 688 aaPredicted RBP28.09■■■□□ 2.09
CAPN1-222ENST00000532285 ZAP70P43403 619 aa28.09■■■□□ 2.09
CAPN1-222ENST00000532285 MAP3K9P80192 1104 aa28.09■■■□□ 2.09
CAPN1-222ENST00000532285 DCAF15Q66K64 600 aa28.09■■■□□ 2.09
CAPN1-222ENST00000532285 WNK4Q96J92 1243 aa28.09■■■□□ 2.09
CAPN1-222ENST00000532285 RNF186Q9NXI6 227 aa28.09■■■□□ 2.09
CAPN1-222ENST00000532285 ENTPD3O75355 529 aa28.08■■■□□ 2.09
CAPN1-222ENST00000532285 MAP4K4O95819 1239 aaPredicted RBP28.08■■■□□ 2.09
CAPN1-222ENST00000532285 TM4SF4P48230 202 aa28.08■■■□□ 2.09
CAPN1-222ENST00000532285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.08■■■□□ 2.09
CAPN1-222ENST00000532285 DOCK2Q92608 1830 aa28.08■■■□□ 2.09
CAPN1-222ENST00000532285 TRPA1O75762 1119 aa28.07■■■□□ 2.08
CAPN1-222ENST00000532285 IFIT2P09913 472 aaKnown RBP28.07■■■□□ 2.08
CAPN1-222ENST00000532285 RGS3P49796 1198 aa28.07■■■□□ 2.08
CAPN1-222ENST00000532285 SREBF2Q12772 1141 aa28.07■■■□□ 2.08
CAPN1-222ENST00000532285 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.07■■■□□ 2.08
CAPN1-222ENST00000532285 CASP8AP2Q9UKL3 1982 aa28.07■■■□□ 2.08
CAPN1-222ENST00000532285 NAA16Q6N069 864 aaPredicted RBP28.06■■■□□ 2.08
CAPN1-222ENST00000532285 TNS4Q8IZW8 715 aa28.06■■■□□ 2.08
CAPN1-222ENST00000532285 CSADQ9Y600 493 aa28.06■■■□□ 2.08
CAPN1-222ENST00000532285 RFX7Q2KHR2 1363 aa28.06■■■□□ 2.08
CAPN1-222ENST00000532285 WDHD1O75717 1129 aaPredicted RBP28.05■■■□□ 2.08
CAPN1-222ENST00000532285 INHBEP58166 350 aa28.05■■■□□ 2.08
CAPN1-222ENST00000532285 RHBDL3P58872 404 aa28.05■■■□□ 2.08
CAPN1-222ENST00000532285 ZFPM1Q8IX07 1006 aa28.05■■■□□ 2.08
CAPN1-222ENST00000532285 NOL10Q9BSC4 688 aaKnown RBP28.05■■■□□ 2.08
CAPN1-222ENST00000532285 ZNF341Q9BYN7 854 aa28.05■■■□□ 2.08
CAPN1-222ENST00000532285 ELP3Q9H9T3 547 aa28.05■■■□□ 2.08
CAPN1-222ENST00000532285 PIH1D3Q9NQM4 214 aaKnown RBP28.05■■■□□ 2.08
CAPN1-222ENST00000532285 MANSC4A6NHS7 340 aaPredicted RBP28.04■■■□□ 2.08
CAPN1-222ENST00000532285 VGLL4Q14135 290 aa28.04■■■□□ 2.08
CAPN1-222ENST00000532285 MIGA2Q7L4E1 593 aa28.04■■■□□ 2.08
CAPN1-222ENST00000532285 WRNIP1Q96S55 665 aa28.04■■■□□ 2.08
CAPN1-222ENST00000532285 NPM3O75607 178 aaKnown RBP28.03■■■□□ 2.08
CAPN1-222ENST00000532285 LRRCC1Q9C099 1032 aa28.03■■■□□ 2.08
CAPN1-222ENST00000532285 BAG3O95817 575 aa28.02■■■□□ 2.08
CAPN1-222ENST00000532285 OPTNQ96CV9 577 aa28.02■■■□□ 2.08
CAPN1-222ENST00000532285 BCL11AQ9H165 835 aa28.02■■■□□ 2.08
CAPN1-222ENST00000532285 DDX4Q9NQI0 724 aaKnown RBP28.02■■■□□ 2.08
CAPN1-222ENST00000532285 CDK5RAP2Q96SN8 1893 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms