RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 TLR7Q9NYK1 1049 aaKnown RBP23.34■■□□□ 1.33
UBXN1-211ENST00000531056 RPAP1Q9BWH6 1393 aaPredicted RBP23.34■■□□□ 1.33
UBXN1-211ENST00000531056 HMMRO75330 724 aa23.33■■□□□ 1.33
UBXN1-211ENST00000531056 HSP90AB4PQ58FF6 505 aa23.33■■□□□ 1.33
UBXN1-211ENST00000531056 TTC39AQ5SRH9 613 aa23.33■■□□□ 1.33
UBXN1-211ENST00000531056 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
UBXN1-211ENST00000531056 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
UBXN1-211ENST00000531056 ZNF384Q8TF68 577 aa23.33■■□□□ 1.33
UBXN1-211ENST00000531056 ZNF512BQ96KM6 892 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-211ENST00000531056 PRDM10Q9NQV6 1147 aa23.33■■□□□ 1.33
UBXN1-211ENST00000531056 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-211ENST00000531056 LBX1P52954 281 aa23.32■■□□□ 1.32
UBXN1-211ENST00000531056 CCDC158Q5M9N0 1113 aa23.32■■□□□ 1.32
UBXN1-211ENST00000531056 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
UBXN1-211ENST00000531056 FAM163AQ96GL9 167 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-211ENST00000531056 CCDC8Q9H0W5 538 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-211ENST00000531056 RFX7Q2KHR2 1363 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 MYO5AQ9Y4I1 1855 aaKnown RBP23.31■■□□□ 1.32
UBXN1-211ENST00000531056 UNCXA6NJT0 531 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 CA12O43570 354 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 MECOMQ03112 1051 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 TBC1D9Q6ZT07 1266 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 RHPN1Q8TCX5 695 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 MROH7-TTC4A0A0A0MT08 1334 aa23.31■■□□□ 1.32
UBXN1-211ENST00000531056 IREB2P48200 963 aaKnown RBP23.3■■□□□ 1.32
UBXN1-211ENST00000531056 SLF2Q8IX21 1173 aa23.3■■□□□ 1.32
UBXN1-211ENST00000531056 CLMNQ96JQ2 1002 aa23.3■■□□□ 1.32
UBXN1-211ENST00000531056 CSRNP1Q96S65 589 aa23.3■■□□□ 1.32
UBXN1-211ENST00000531056 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
UBXN1-211ENST00000531056 NFIAQ12857 509 aa23.29■■□□□ 1.32
UBXN1-211ENST00000531056 NSUN4Q96CB9 384 aaKnown RBP23.29■■□□□ 1.32
UBXN1-211ENST00000531056 SNRKQ9NRH2 765 aa23.29■■□□□ 1.32
UBXN1-211ENST00000531056 USP40Q9NVE5 1235 aa23.29■■□□□ 1.32
UBXN1-211ENST00000531056 TSKSQ9UJT2 592 aa23.29■■□□□ 1.32
UBXN1-211ENST00000531056 AACSQ86V21 672 aa23.28■■□□□ 1.32
UBXN1-211ENST00000531056 REM2Q8IYK8 340 aaPredicted RBP23.28■■□□□ 1.32
UBXN1-211ENST00000531056 FAM151AQ8WW52 585 aa23.28■■□□□ 1.32
UBXN1-211ENST00000531056 KIF1BPQ96EK5 621 aa23.28■■□□□ 1.32
UBXN1-211ENST00000531056 IL1RAPL2Q9NP60 686 aa23.28■■□□□ 1.32
UBXN1-211ENST00000531056 FAM198AQ9UFP1 575 aa23.28■■□□□ 1.32
UBXN1-211ENST00000531056 DOCK2Q92608 1830 aa23.28■■□□□ 1.32
UBXN1-211ENST00000531056 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
UBXN1-211ENST00000531056 SPRYD7Q5W111 196 aa23.27■■□□□ 1.32
UBXN1-211ENST00000531056 ANKRD13AQ8IZ07 590 aa23.27■■□□□ 1.32
UBXN1-211ENST00000531056 SAGE1Q9NXZ1 904 aa23.27■■□□□ 1.32
UBXN1-211ENST00000531056 GPR75-ASB3A0A0A6YYF3 556 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 RAB11FIP3O75154 756 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 BTDP43251 543 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 MKRN3Q13064 507 aaKnown RBP23.26■■□□□ 1.31
UBXN1-211ENST00000531056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.26■■□□□ 1.315e-9■□□□□ 8.5
UBXN1-211ENST00000531056 SLC10A4Q96EP9 437 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 WNK4Q96J92 1243 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 IDI2Q9BXS1 227 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 RAI14Q9P0K7 980 aa23.26■■□□□ 1.31
UBXN1-211ENST00000531056 ZAP70P43403 619 aa23.25■■□□□ 1.31
UBXN1-211ENST00000531056 GSTO1P78417 241 aa23.25■■□□□ 1.31
UBXN1-211ENST00000531056 TCP10Q12799 353 aa23.25■■□□□ 1.31
UBXN1-211ENST00000531056 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-211ENST00000531056 RNF186Q9NXI6 227 aa23.25■■□□□ 1.31
UBXN1-211ENST00000531056 LRP2BPQ9P2M1 347 aa23.25■■□□□ 1.31
UBXN1-211ENST00000531056 AK9Q5TCS8 1911 aa23.24■■□□□ 1.31
UBXN1-211ENST00000531056 APBB1O00213 710 aa23.24■■□□□ 1.31
UBXN1-211ENST00000531056 ZBTB48P10074 688 aaPredicted RBP23.24■■□□□ 1.31
UBXN1-211ENST00000531056 RHBDL3P58872 404 aa23.24■■□□□ 1.31
UBXN1-211ENST00000531056 HOOK2Q96ED9 719 aa23.24■■□□□ 1.31
UBXN1-211ENST00000531056 WDHD1O75717 1129 aaPredicted RBP23.23■■□□□ 1.31
UBXN1-211ENST00000531056 LDHCP07864 332 aa23.23■■□□□ 1.31
UBXN1-211ENST00000531056 GJA5P36382 358 aa23.23■■□□□ 1.31
UBXN1-211ENST00000531056 TM4SF4P48230 202 aa23.23■■□□□ 1.31
UBXN1-211ENST00000531056 RGS3P49796 1198 aa23.23■■□□□ 1.31
UBXN1-211ENST00000531056 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
UBXN1-211ENST00000531056 CLASRPQ8N2M8 674 aaKnown RBP23.23■■□□□ 1.31
UBXN1-211ENST00000531056 PIH1D3Q9NQM4 214 aaKnown RBP23.23■■□□□ 1.31
UBXN1-211ENST00000531056 CDK5RAP2Q96SN8 1893 aa23.22■■□□□ 1.31
UBXN1-211ENST00000531056 ENTPD3O75355 529 aa23.22■■□□□ 1.31
UBXN1-211ENST00000531056 MAP3K9P80192 1104 aa23.22■■□□□ 1.31
UBXN1-211ENST00000531056 VGLL4Q14135 290 aa23.22■■□□□ 1.31
UBXN1-211ENST00000531056 DDX4Q9NQI0 724 aaKnown RBP23.22■■□□□ 1.31
UBXN1-211ENST00000531056 ATRNL1Q5VV63 1379 aa23.22■■□□□ 1.31
UBXN1-211ENST00000531056 IGSF3O75054 1194 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 TRPA1O75762 1119 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 SREBF2Q12772 1141 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 DCAF15Q66K64 600 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 TNS4Q8IZW8 715 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 ELP3Q9H9T3 547 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.21■■□□□ 1.31
UBXN1-211ENST00000531056 FOCADQ5VW36 1801 aa23.21■■□□□ 1.31
UBXN1-211ENST00000531056 MAP4K4O95819 1239 aaPredicted RBP23.2■■□□□ 1.3
UBXN1-211ENST00000531056 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
UBXN1-211ENST00000531056 SH3BP5LQ7L8J4 393 aa23.2■■□□□ 1.3
UBXN1-211ENST00000531056 WRNIP1Q96S55 665 aa23.2■■□□□ 1.3
UBXN1-211ENST00000531056 NDUFB9Q9Y6M9 179 aa23.2■■□□□ 1.3
UBXN1-211ENST00000531056 MANSC4A6NHS7 340 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-211ENST00000531056 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
UBXN1-211ENST00000531056 IFFO2Q5TF58 517 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 MIGA2Q7L4E1 593 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 ADGRA1Q86SQ6 560 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 OPTNQ96CV9 577 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 ZNF341Q9BYN7 854 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 CSADQ9Y600 493 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms