RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	IRF6	O14896	467 aa		19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	CAP1	Q01518	475 aa		19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	ATP2B3	Q16720	1220 aa		19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	TRMT2A	Q8IZ69	625 aa	Known RBP	19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	CDCA7L	Q96GN5	454 aa		19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	SIL1	Q9H173	461 aa		19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	DAGLA	Q9Y4D2	1042 aa		19.42	■□□□□ 0.7
TM9SF1-209	ENST00000530468	BTBD19	C9JJ37	291 aa		19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	SEMA3E	O15041	775 aa		19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	TLR2	O60603	784 aa		19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	IL15	P40933	162 aa	Predicted RBP	19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	PPAT	Q06203	517 aa		19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	NBPF11	Q86T75	865 aa		19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	API5	Q9BZZ5	524 aa	Known RBP	19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	SALL1	Q9NSC2	1324 aa		19.41	■□□□□ 0.7
TM9SF1-209	ENST00000530468	ZBTB22	O15209	634 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	LDHB	P07195	334 aa	Known RBP	19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	PRDX5	P30044	214 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	KIF22	Q14807	665 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	CDC42EP5	Q6NZY7	148 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	GCC1	Q96CN9	775 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	TMEM106C	Q9BVX2	250 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	DENND2A	Q9ULE3	1009 aa		19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	NOB1	Q9ULX3	412 aa	Known RBP	19.4	■□□□□ 0.7
TM9SF1-209	ENST00000530468	RBBP6	Q7Z6E9	1792 aa	Known RBP	19.39	■□□□□ 0.7
TM9SF1-209	ENST00000530468	MYH13	Q9UKX3	1938 aa		19.39	■□□□□ 0.7
TM9SF1-209	ENST00000530468	DIXDC1	Q155Q3	683 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	SLC9C1	Q4G0N8	1177 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	MIGA2	Q7L4E1	593 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	ZNF333	Q96JL9	665 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	ZNF112	Q9UJU3	913 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	PTCH2	Q9Y6C5	1203 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	HTT	P42858	3142 aa		19.39	■□□□□ 0.69
TM9SF1-209	ENST00000530468	GNRH1	P01148	92 aa		19.38	■□□□□ 0.69
TM9SF1-209	ENST00000530468	INPP5B	P32019	993 aa		19.38	■□□□□ 0.69
TM9SF1-209	ENST00000530468	LACTB	P83111	547 aa	Predicted RBP	19.38	■□□□□ 0.69
TM9SF1-209	ENST00000530468	TCP10	Q12799	353 aa		19.38	■□□□□ 0.69
TM9SF1-209	ENST00000530468	ZGPAT	Q8N5A5	531 aa	Known RBP	19.38	■□□□□ 0.69
TM9SF1-209	ENST00000530468	LRRFIP2	Q9Y608	721 aa	Known RBP	19.38	■□□□□ 0.69
TM9SF1-209	ENST00000530468	PHKA1	P46020	1223 aa		19.37	■□□□□ 0.69
TM9SF1-209	ENST00000530468	NOL9	Q5SY16	702 aa	Known RBP	19.37	■□□□□ 0.69
TM9SF1-209	ENST00000530468	ANKRD23	Q86SG2	305 aa		19.37	■□□□□ 0.69
TM9SF1-209	ENST00000530468	COPRS	Q9NQ92	184 aa		19.37	■□□□□ 0.69
TM9SF1-209	ENST00000530468	USP40	Q9NVE5	1235 aa		19.37	■□□□□ 0.69
TM9SF1-209	ENST00000530468	KCNH4	Q9UQ05	1017 aa		19.37	■□□□□ 0.69
TM9SF1-209	ENST00000530468	PRMT2	P55345	433 aa		19.36	■□□□□ 0.69
TM9SF1-209	ENST00000530468	NFIA	Q12857	509 aa		19.36	■□□□□ 0.69
TM9SF1-209	ENST00000530468	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	19.36	■□□□□ 0.69
TM9SF1-209	ENST00000530468	FAM198A	Q9UFP1	575 aa		19.36	■□□□□ 0.69
TM9SF1-209	ENST00000530468	PA2G4	Q9UQ80	394 aa	Known RBP	19.36	■□□□□ 0.69
TM9SF1-209	ENST00000530468	EN2	P19622	333 aa	Predicted RBP	19.35	■□□□□ 0.69
TM9SF1-209	ENST00000530468	PDS5A	Q29RF7	1337 aa	Known RBP	19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	CCDC102B	Q68D86	513 aa		19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	C17orf99	Q6UX52	265 aa		19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	SLF2	Q8IX21	1173 aa		19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	ARHGAP45	Q92619	1136 aa		19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	MEIS3	Q99687	375 aa		19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	IDI2	Q9BXS1	227 aa		19.34	■□□□□ 0.69
TM9SF1-209	ENST00000530468	GAK	O14976	1311 aa		19.33	■□□□□ 0.69
TM9SF1-209	ENST00000530468	PDHX	O00330	501 aa		19.33	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ENTPD3	O75355	529 aa		19.33	■□□□□ 0.68
TM9SF1-209	ENST00000530468	GNAI3	P08754	354 aa		19.33	■□□□□ 0.68
TM9SF1-209	ENST00000530468	SLC4A8	Q2Y0W8	1093 aa		19.33	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ARHGAP39	Q9C0H5	1083 aa		19.33	■□□□□ 0.68
TM9SF1-209	ENST00000530468	CXCL11	O14625	94 aa		19.32	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ADORA1	P30542	326 aa		19.32	■□□□□ 0.68
TM9SF1-209	ENST00000530468	RARS	P54136	660 aa	Known RBP	19.32	■□□□□ 0.68
TM9SF1-209	ENST00000530468	DZIP1	Q86YF9	867 aa	Known RBP	19.32	■□□□□ 0.68
TM9SF1-209	ENST00000530468	AKAP2	Q9Y2D5	859 aa		19.32	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ADGRA2	Q96PE1	1338 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	RGS3	P49796	1198 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	MTX1	Q13505	466 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	RASGRF1	Q13972	1273 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	SPTY2D1	Q68D10	685 aa	Predicted RBP	19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	FAM163A	Q96GL9	167 aa	Predicted RBP	19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	CPA4	Q9UI42	421 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	RFX7	Q2KHR2	1363 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ATRNL1	Q5VV63	1379 aa		19.31	■□□□□ 0.68
TM9SF1-209	ENST00000530468	SRGAP3	O43295	1099 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	HOXD10	P28358	340 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	TIMM10	P62072	90 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	MOGS	Q13724	837 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	MVP	Q14764	893 aa	Known RBP	19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ZFPM1	Q8IX07	1006 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	SCYL3	Q8IZE3	742 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	SH3TC2	Q8TF17	1288 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	PARK7	Q99497	189 aa	Known RBP	19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	ABCF2	Q9UG63	623 aa		19.3	■□□□□ 0.68
TM9SF1-209	ENST00000530468	KIAA0100	Q14667	2235 aa	Known RBP	19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468		A0A1B0GUL7	405 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	PHF20L1	A8MW92	1017 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	PSMC4	P43686	418 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	XAGE2	Q96GT9	111 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	PICK1	Q9NRD5	415 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	SRRD	Q9UH36	339 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	AK9	Q5TCS8	1911 aa		19.29	■□□□□ 0.68
TM9SF1-209	ENST00000530468	CCER2	I3L3R5	266 aa		19.28	■□□□□ 0.68
TM9SF1-209	ENST00000530468	MAP3K10	Q02779	954 aa		19.28	■□□□□ 0.68
TM9SF1-209	ENST00000530468	TFCP2	Q12800	502 aa		19.28	■□□□□ 0.68
TM9SF1-209	ENST00000530468	FASTKD5	Q7L8L6	764 aa	Known RBP	19.28	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms