RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
CTSB-215ENST00000528965 NOB1Q9ULX3 412 aaKnown RBP19.45■□□□□ 0.7
CTSB-215ENST00000528965 SNCAIPQ9Y6H5 919 aa19.45■□□□□ 0.7
CTSB-215ENST00000528965 TNRC18O15417 2968 aaPredicted RBP19.44■□□□□ 0.7
CTSB-215ENST00000528965 LDHBP07195 334 aaKnown RBP19.44■□□□□ 0.7
CTSB-215ENST00000528965 PPIL2Q13356 520 aa19.44■□□□□ 0.7
CTSB-215ENST00000528965 LRRFIP2Q9Y608 721 aaKnown RBP19.44■□□□□ 0.7
CTSB-215ENST00000528965 SALL1Q9NSC2 1324 aa19.44■□□□□ 0.7
CTSB-215ENST00000528965 ZGPATQ8N5A5 531 aaKnown RBP19.43■□□□□ 0.7
CTSB-215ENST00000528965 FAM151AQ8WW52 585 aa19.43■□□□□ 0.7
CTSB-215ENST00000528965 DAGLAQ9Y4D2 1042 aa19.43■□□□□ 0.7
CTSB-215ENST00000528965 PRDX5P30044 214 aa19.42■□□□□ 0.7
CTSB-215ENST00000528965 PPATQ06203 517 aa19.42■□□□□ 0.7
CTSB-215ENST00000528965 KIF22Q14807 665 aa19.42■□□□□ 0.7
CTSB-215ENST00000528965 FAM43AQ8N2R8 423 aa19.42■□□□□ 0.7
CTSB-215ENST00000528965 ZKSCAN4Q969J2 545 aaPredicted RBP19.42■□□□□ 0.7
CTSB-215ENST00000528965 ARMC5Q96C12 935 aa19.42■□□□□ 0.7
CTSB-215ENST00000528965 DIXDC1Q155Q3 683 aa19.41■□□□□ 0.7
CTSB-215ENST00000528965 CDC42EP5Q6NZY7 148 aa19.41■□□□□ 0.7
CTSB-215ENST00000528965 COPRSQ9NQ92 184 aa19.41■□□□□ 0.7
CTSB-215ENST00000528965 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
CTSB-215ENST00000528965 IRF6O14896 467 aa19.4■□□□□ 0.7
CTSB-215ENST00000528965 ZBTB22O15209 634 aa19.4■□□□□ 0.7
CTSB-215ENST00000528965 GNAI3P08754 354 aa19.4■□□□□ 0.7
CTSB-215ENST00000528965 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
CTSB-215ENST00000528965 TLR2O60603 784 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 TCP10Q12799 353 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 SLC9C1Q4G0N8 1177 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 MIGA2Q7L4E1 593 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 SLF2Q8IX21 1173 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 ARHGAP45Q92619 1136 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 MEIS3Q99687 375 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 AKAP2Q9Y2D5 859 aa19.39■□□□□ 0.69
CTSB-215ENST00000528965 PDS5AQ29RF7 1337 aaKnown RBP19.39■□□□□ 0.69
CTSB-215ENST00000528965 RBBP6Q7Z6E9 1792 aaKnown RBP19.39■□□□□ 0.69
CTSB-215ENST00000528965 BTBD19C9JJ37 291 aa19.38■□□□□ 0.69
CTSB-215ENST00000528965 GNRH1P01148 92 aa19.38■□□□□ 0.69
CTSB-215ENST00000528965 PHKA1P46020 1223 aa19.38■□□□□ 0.69
CTSB-215ENST00000528965 RARSP54136 660 aaKnown RBP19.38■□□□□ 0.69
CTSB-215ENST00000528965 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
CTSB-215ENST00000528965 TMEM106CQ9BVX2 250 aa19.38■□□□□ 0.69
CTSB-215ENST00000528965 USP40Q9NVE5 1235 aa19.38■□□□□ 0.69
CTSB-215ENST00000528965 PA2G4Q9UQ80 394 aaKnown RBP19.38■□□□□ 0.69
CTSB-215ENST00000528965 INPP5BP32019 993 aa19.37■□□□□ 0.69
CTSB-215ENST00000528965 NFIAQ12857 509 aa19.37■□□□□ 0.69
CTSB-215ENST00000528965 MVPQ14764 893 aaKnown RBP19.37■□□□□ 0.69
CTSB-215ENST00000528965 SPTY2D1Q68D10 685 aaPredicted RBP19.37■□□□□ 0.69
CTSB-215ENST00000528965 CCDC102BQ68D86 513 aa19.37■□□□□ 0.69
CTSB-215ENST00000528965 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
CTSB-215ENST00000528965 ZNF112Q9UJU3 913 aa19.37■□□□□ 0.69
CTSB-215ENST00000528965 POTEFA5A3E0 1075 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 IPO8O15397 1037 aaKnown RBP19.36■□□□□ 0.69
CTSB-215ENST00000528965 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 PRMT2P55345 433 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 LACTBP83111 547 aaPredicted RBP19.36■□□□□ 0.69
CTSB-215ENST00000528965 NOL9Q5SY16 702 aaKnown RBP19.36■□□□□ 0.69
CTSB-215ENST00000528965 ANKRD23Q86SG2 305 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 PTCH2Q9Y6C5 1203 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 HTTP42858 3142 aa19.36■□□□□ 0.69
CTSB-215ENST00000528965 GAKO14976 1311 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 ENTPD3O75355 529 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 ADORA1P30542 326 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 IDI2Q9BXS1 227 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 FAM198AQ9UFP1 575 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 ABCF2Q9UG63 623 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 KCNH4Q9UQ05 1017 aa19.35■□□□□ 0.69
CTSB-215ENST00000528965 MTX1Q13505 466 aa19.34■□□□□ 0.69
CTSB-215ENST00000528965 RASGRF1Q13972 1273 aa19.34■□□□□ 0.69
CTSB-215ENST00000528965 AK9Q5TCS8 1911 aa19.33■□□□□ 0.69
CTSB-215ENST00000528965 DOCK2Q92608 1830 aa19.33■□□□□ 0.69
CTSB-215ENST00000528965 A0A1B0GUL7 405 aa19.33■□□□□ 0.68
CTSB-215ENST00000528965 RGS3P49796 1198 aa19.33■□□□□ 0.68
CTSB-215ENST00000528965 CAP1Q01518 475 aa19.33■□□□□ 0.68
CTSB-215ENST00000528965 ZSCAN29Q8IWY8 852 aaPredicted RBP19.33■□□□□ 0.68
CTSB-215ENST00000528965 PARK7Q99497 189 aaKnown RBP19.33■□□□□ 0.68
CTSB-215ENST00000528965 PICK1Q9NRD5 415 aa19.33■□□□□ 0.68
CTSB-215ENST00000528965 KIAA0100Q14667 2235 aaKnown RBP19.33■□□□□ 0.68
CTSB-215ENST00000528965 RFX7Q2KHR2 1363 aa19.32■□□□□ 0.68
CTSB-215ENST00000528965 PDHXO00330 501 aa19.32■□□□□ 0.68
CTSB-215ENST00000528965 SLC4A8Q2Y0W8 1093 aa19.32■□□□□ 0.68
CTSB-215ENST00000528965 XAGE2Q96GT9 111 aa19.32■□□□□ 0.68
CTSB-215ENST00000528965 ATRNL1Q5VV63 1379 aa19.32■□□□□ 0.68
CTSB-215ENST00000528965 MROH7-TTC4A0A0A0MT08 1334 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 CXCL11O14625 94 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 HOXD10P28358 340 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 BTDP43251 543 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 TIMM10P62072 90 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 TFCP2Q12800 502 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 GORABQ5T7V8 394 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 SCYL3Q8IZE3 742 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 FAM163AQ96GL9 167 aaPredicted RBP19.31■□□□□ 0.68
CTSB-215ENST00000528965 ARHGAP39Q9C0H5 1083 aa19.31■□□□□ 0.68
CTSB-215ENST00000528965 MYH2Q9UKX2 1941 aa19.3■□□□□ 0.68
CTSB-215ENST00000528965 GNAI2P04899 355 aa19.3■□□□□ 0.68
CTSB-215ENST00000528965 EN2P19622 333 aaPredicted RBP19.3■□□□□ 0.68
CTSB-215ENST00000528965 GSTO1P78417 241 aa19.3■□□□□ 0.68
CTSB-215ENST00000528965 C17orf99Q6UX52 265 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms