RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MCAMP43121 646 aa32.37■■■□□ 2.77
TSPAN4-217ENST00000527644 SIRT2Q8IXJ6 389 aa32.37■■■□□ 2.77
TSPAN4-217ENST00000527644 IREB2P48200 963 aaKnown RBP32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 LBX1P52954 281 aa32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 CDC42EP5Q6NZY7 148 aa32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 PI16Q6UXB8 463 aa32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 EAF2Q96CJ1 260 aaPredicted RBP32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 FAM163AQ96GL9 167 aaPredicted RBP32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 ZNF512BQ96KM6 892 aaPredicted RBP32.36■■■□□ 2.77
TSPAN4-217ENST00000527644 GAKO14976 1311 aa32.35■■■□□ 2.77
TSPAN4-217ENST00000527644 USP2O75604 605 aaPredicted RBP32.35■■■□□ 2.77
TSPAN4-217ENST00000527644 DBNLQ9UJU6 430 aaKnown RBP32.35■■■□□ 2.77
TSPAN4-217ENST00000527644 CDAN1Q8IWY9 1227 aa32.34■■■□□ 2.77
TSPAN4-217ENST00000527644 CSRNP1Q96S65 589 aa32.34■■■□□ 2.77
TSPAN4-217ENST00000527644 CCDC8Q9H0W5 538 aaPredicted RBP32.34■■■□□ 2.77
TSPAN4-217ENST00000527644 USP40Q9NVE5 1235 aa32.34■■■□□ 2.77
TSPAN4-217ENST00000527644 TBC1D9Q6ZT07 1266 aa32.33■■■□□ 2.77
TSPAN4-217ENST00000527644 RHPN1Q8TCX5 695 aa32.33■■■□□ 2.77
TSPAN4-217ENST00000527644 SLC10A4Q96EP9 437 aa32.33■■■□□ 2.77
TSPAN4-217ENST00000527644 MYH2Q9UKX2 1941 aa32.32■■■□□ 2.76
TSPAN4-217ENST00000527644 MECOMQ03112 1051 aa32.32■■■□□ 2.76
TSPAN4-217ENST00000527644 ANKRD13AQ8IZ07 590 aa32.31■■■□□ 2.76
TSPAN4-217ENST00000527644 FAM151AQ8WW52 585 aa32.31■■■□□ 2.76
TSPAN4-217ENST00000527644 HOOK2Q96ED9 719 aa32.31■■■□□ 2.76
TSPAN4-217ENST00000527644 TLR7Q9NYK1 1049 aaKnown RBP32.31■■■□□ 2.76
TSPAN4-217ENST00000527644 RPAP1Q9BWH6 1393 aaPredicted RBP32.31■■■□□ 2.76
TSPAN4-217ENST00000527644 GSTO1P78417 241 aa32.3■■■□□ 2.76
TSPAN4-217ENST00000527644 AACSQ86V21 672 aa32.3■■■□□ 2.76
TSPAN4-217ENST00000527644 KIF1BPQ96EK5 621 aa32.3■■■□□ 2.76
TSPAN4-217ENST00000527644 SNRKQ9NRH2 765 aa32.3■■■□□ 2.76
TSPAN4-217ENST00000527644 MROH7-TTC4A0A0A0MT08 1334 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 RAB11FIP3O75154 756 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 LDHCP07864 332 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 SPRYD7Q5W111 196 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 NSUN4Q96CB9 384 aaKnown RBP32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 CLMNQ96JQ2 1002 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 SAGE1Q9NXZ1 904 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 RAI14Q9P0K7 980 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 LRP2BPQ9P2M1 347 aa32.29■■■□□ 2.76
TSPAN4-217ENST00000527644 NFIAQ12857 509 aa32.28■■■□□ 2.76
TSPAN4-217ENST00000527644 ZNF384Q8TF68 577 aa32.28■■■□□ 2.76
TSPAN4-217ENST00000527644 IL1RAPL2Q9NP60 686 aa32.28■■■□□ 2.76
TSPAN4-217ENST00000527644 TSKSQ9UJT2 592 aa32.28■■■□□ 2.76
TSPAN4-217ENST00000527644 GPR75-ASB3A0A0A6YYF3 556 aa32.27■■■□□ 2.76
TSPAN4-217ENST00000527644 CLASRPQ8N2M8 674 aaKnown RBP32.27■■■□□ 2.76
TSPAN4-217ENST00000527644 AKAP11Q9UKA4 1901 aa32.26■■■□□ 2.76
TSPAN4-217ENST00000527644 IGSF3O75054 1194 aa32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 BTDP43251 543 aa32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 RRP1P56182 461 aaKnown RBP32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 TCP10Q12799 353 aa32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 MKRN3Q13064 507 aaKnown RBP32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 IDI2Q9BXS1 227 aa32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 RNF186Q9NXI6 227 aa32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 FAM198AQ9UFP1 575 aa32.26■■■□□ 2.75
TSPAN4-217ENST00000527644 APBB1O00213 710 aa32.25■■■□□ 2.75
TSPAN4-217ENST00000527644 CYP2E1P05181 493 aaPredicted RBP32.25■■■□□ 2.75
TSPAN4-217ENST00000527644 ZBTB48P10074 688 aaPredicted RBP32.25■■■□□ 2.75
TSPAN4-217ENST00000527644 TM4SF4P48230 202 aa32.25■■■□□ 2.75
TSPAN4-217ENST00000527644 MAP3K9P80192 1104 aa32.25■■■□□ 2.75
TSPAN4-217ENST00000527644 ZAP70P43403 619 aa32.24■■■□□ 2.75
TSPAN4-217ENST00000527644 DCAF15Q66K64 600 aa32.24■■■□□ 2.75
TSPAN4-217ENST00000527644 TNS4Q8IZW8 715 aa32.24■■■□□ 2.75
TSPAN4-217ENST00000527644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.24■■■□□ 2.75
TSPAN4-217ENST00000527644 WNK4Q96J92 1243 aa32.24■■■□□ 2.75
TSPAN4-217ENST00000527644 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.24■■■□□ 2.75
TSPAN4-217ENST00000527644 ENTPD3O75355 529 aa32.23■■■□□ 2.75
TSPAN4-217ENST00000527644 TRPA1O75762 1119 aa32.23■■■□□ 2.75
TSPAN4-217ENST00000527644 SREBF2Q12772 1141 aa32.23■■■□□ 2.75
TSPAN4-217ENST00000527644 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.23■■■□□ 2.75
TSPAN4-217ENST00000527644 MAP4K4O95819 1239 aaPredicted RBP32.22■■■□□ 2.75
TSPAN4-217ENST00000527644 RGS3P49796 1198 aa32.21■■■□□ 2.75
TSPAN4-217ENST00000527644 CSADQ9Y600 493 aa32.21■■■□□ 2.75
TSPAN4-217ENST00000527644 RFX7Q2KHR2 1363 aa32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 MANSC4A6NHS7 340 aaPredicted RBP32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 WDHD1O75717 1129 aaPredicted RBP32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 IFIT2P09913 472 aaKnown RBP32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 INHBEP58166 350 aa32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 RHBDL3P58872 404 aa32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 NAA16Q6N069 864 aaPredicted RBP32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 ZNF341Q9BYN7 854 aa32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 ELP3Q9H9T3 547 aa32.2■■■□□ 2.75
TSPAN4-217ENST00000527644 VGLL4Q14135 290 aa32.19■■■□□ 2.74
TSPAN4-217ENST00000527644 MIGA2Q7L4E1 593 aa32.19■■■□□ 2.74
TSPAN4-217ENST00000527644 ZFPM1Q8IX07 1006 aa32.19■■■□□ 2.74
TSPAN4-217ENST00000527644 OTOFQ9HC10 1997 aa32.19■■■□□ 2.74
TSPAN4-217ENST00000527644 WRNIP1Q96S55 665 aa32.18■■■□□ 2.74
TSPAN4-217ENST00000527644 PIH1D3Q9NQM4 214 aaKnown RBP32.18■■■□□ 2.74
TSPAN4-217ENST00000527644 NPM3O75607 178 aaKnown RBP32.17■■■□□ 2.74
TSPAN4-217ENST00000527644 OPTNQ96CV9 577 aa32.17■■■□□ 2.74
TSPAN4-217ENST00000527644 NOL10Q9BSC4 688 aaKnown RBP32.17■■■□□ 2.74
TSPAN4-217ENST00000527644 AK9Q5TCS8 1911 aa32.16■■■□□ 2.74
TSPAN4-217ENST00000527644 GJA5P36382 358 aa32.16■■■□□ 2.74
TSPAN4-217ENST00000527644 DDX4Q9NQI0 724 aaKnown RBP32.16■■■□□ 2.74
TSPAN4-217ENST00000527644 BAG3O95817 575 aa32.15■■■□□ 2.74
TSPAN4-217ENST00000527644 PICALMQ13492 652 aa32.15■■■□□ 2.74
TSPAN4-217ENST00000527644 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.15■■■□□ 2.74
TSPAN4-217ENST00000527644 LRRCC1Q9C099 1032 aa32.15■■■□□ 2.74
TSPAN4-217ENST00000527644 ZSCAN29Q8IWY8 852 aaPredicted RBP32.14■■■□□ 2.74
TSPAN4-217ENST00000527644 ZNF112Q9UJU3 913 aa32.14■■■□□ 2.74
TSPAN4-217ENST00000527644 MAST2Q6P0Q8 1798 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms