RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 DCAF15Q66K64 600 aa23.46■■□□□ 1.35
CAPN1-206ENST00000526966 ATG9AQ7Z3C6 839 aa23.46■■□□□ 1.35
CAPN1-206ENST00000526966 BTBD19C9JJ37 291 aa23.45■■□□□ 1.34
CAPN1-206ENST00000526966 EN2P19622 333 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-206ENST00000526966 SLFN5Q08AF3 891 aa23.45■■□□□ 1.34
CAPN1-206ENST00000526966 ALDH1L2Q3SY69 923 aa23.45■■□□□ 1.34
CAPN1-206ENST00000526966 WDHD1O75717 1129 aaPredicted RBP23.44■■□□□ 1.34
CAPN1-206ENST00000526966 FAM151AQ8WW52 585 aa23.44■■□□□ 1.34
CAPN1-206ENST00000526966 ZNF341Q9BYN7 854 aa23.44■■□□□ 1.34
CAPN1-206ENST00000526966 DAGLAQ9Y4D2 1042 aa23.44■■□□□ 1.34
CAPN1-206ENST00000526966 PPATQ06203 517 aa23.43■■□□□ 1.34
CAPN1-206ENST00000526966 SLC9C1Q4G0N8 1177 aa23.43■■□□□ 1.34
CAPN1-206ENST00000526966 FBXO3Q9UK99 471 aa23.43■■□□□ 1.34
CAPN1-206ENST00000526966 DOCK2Q92608 1830 aa23.43■■□□□ 1.34
CAPN1-206ENST00000526966 CEP290O15078 2479 aa23.42■■□□□ 1.34
CAPN1-206ENST00000526966 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
CAPN1-206ENST00000526966 INPP5BP32019 993 aa23.42■■□□□ 1.34
CAPN1-206ENST00000526966 LACTBP83111 547 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-206ENST00000526966 NBPF11Q86T75 865 aa23.42■■□□□ 1.34
CAPN1-206ENST00000526966 TMEM106CQ9BVX2 250 aa23.42■■□□□ 1.34
CAPN1-206ENST00000526966 ZNF112Q9UJU3 913 aa23.42■■□□□ 1.34
CAPN1-206ENST00000526966 CIAO1O76071 339 aa23.41■■□□□ 1.34
CAPN1-206ENST00000526966 PRDX5P30044 214 aa23.41■■□□□ 1.34
CAPN1-206ENST00000526966 DIXDC1Q155Q3 683 aa23.41■■□□□ 1.34
CAPN1-206ENST00000526966 CDC42EP5Q6NZY7 148 aa23.41■■□□□ 1.34
CAPN1-206ENST00000526966 MIGA2Q7L4E1 593 aa23.41■■□□□ 1.34
CAPN1-206ENST00000526966 ARHGAP39Q9C0H5 1083 aa23.41■■□□□ 1.34
CAPN1-206ENST00000526966 SALL1Q9NSC2 1324 aa23.4■■□□□ 1.34
CAPN1-206ENST00000526966 ZBTB22O15209 634 aa23.4■■□□□ 1.34
CAPN1-206ENST00000526966 GNRH1P01148 92 aa23.4■■□□□ 1.34
CAPN1-206ENST00000526966 KCNH4Q9UQ05 1017 aa23.4■■□□□ 1.34
CAPN1-206ENST00000526966 NFIAQ12857 509 aa23.39■■□□□ 1.33
CAPN1-206ENST00000526966 KIF22Q14807 665 aa23.39■■□□□ 1.33
CAPN1-206ENST00000526966 ATP2B3Q16720 1220 aa23.39■■□□□ 1.33
CAPN1-206ENST00000526966 C17orf99Q6UX52 265 aa23.39■■□□□ 1.33
CAPN1-206ENST00000526966 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
CAPN1-206ENST00000526966 ADGRA2Q96PE1 1338 aa23.38■■□□□ 1.33
CAPN1-206ENST00000526966 UBTFL1P0CB47 393 aaPredicted RBP23.38■■□□□ 1.33
CAPN1-206ENST00000526966 HABP4Q5JVS0 413 aaKnown RBP23.38■■□□□ 1.33
CAPN1-206ENST00000526966 NOL9Q5SY16 702 aaKnown RBP23.38■■□□□ 1.33
CAPN1-206ENST00000526966 ANKRD23Q86SG2 305 aa23.38■■□□□ 1.33
CAPN1-206ENST00000526966 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.38■■□□□ 1.33
CAPN1-206ENST00000526966 SIL1Q9H173 461 aa23.38■■□□□ 1.33
CAPN1-206ENST00000526966 FAM198AQ9UFP1 575 aa23.38■■□□□ 1.33
CAPN1-206ENST00000526966 PTPRFP10586 1907 aa23.37■■□□□ 1.33
CAPN1-206ENST00000526966 SEMA3EO15041 775 aa23.37■■□□□ 1.33
CAPN1-206ENST00000526966 LDHBP07195 334 aaKnown RBP23.37■■□□□ 1.33
CAPN1-206ENST00000526966 PRMT2P55345 433 aa23.37■■□□□ 1.33
CAPN1-206ENST00000526966 TCP10Q12799 353 aa23.37■■□□□ 1.33
CAPN1-206ENST00000526966 TRMT2AQ8IZ69 625 aaKnown RBP23.37■■□□□ 1.33
CAPN1-206ENST00000526966 GNL3LQ9NVN8 582 aaKnown RBP23.37■■□□□ 1.33
CAPN1-206ENST00000526966 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
CAPN1-206ENST00000526966 ATRNL1Q5VV63 1379 aa23.37■■□□□ 1.33
CAPN1-206ENST00000526966 MGAMO43451 1857 aa23.36■■□□□ 1.33
CAPN1-206ENST00000526966 MOGSQ13724 837 aa23.36■■□□□ 1.33
CAPN1-206ENST00000526966 SH3TC2Q8TF17 1288 aa23.36■■□□□ 1.33
CAPN1-206ENST00000526966 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
CAPN1-206ENST00000526966 RFX7Q2KHR2 1363 aa23.36■■□□□ 1.33
CAPN1-206ENST00000526966 CTGFP29279 349 aa23.35■■□□□ 1.33
CAPN1-206ENST00000526966 PHKA1P46020 1223 aa23.35■■□□□ 1.33
CAPN1-206ENST00000526966 SLC4A8Q2Y0W8 1093 aa23.35■■□□□ 1.33
CAPN1-206ENST00000526966 DENND2AQ9ULE3 1009 aa23.35■■□□□ 1.33
CAPN1-206ENST00000526966 PDHXO00330 501 aa23.34■■□□□ 1.33
CAPN1-206ENST00000526966 CT47B1P0C2W7 299 aaPredicted RBP23.34■■□□□ 1.33
CAPN1-206ENST00000526966 IL15P40933 162 aaPredicted RBP23.34■■□□□ 1.33
CAPN1-206ENST00000526966 USP40Q9NVE5 1235 aa23.34■■□□□ 1.33
CAPN1-206ENST00000526966 CPA4Q9UI42 421 aa23.34■■□□□ 1.33
CAPN1-206ENST00000526966 GAKO14976 1311 aa23.33■■□□□ 1.33
CAPN1-206ENST00000526966 PHIPQ8WWQ0 1821 aa23.33■■□□□ 1.33
CAPN1-206ENST00000526966 DOCK1Q14185 1865 aa23.33■■□□□ 1.33
CAPN1-206ENST00000526966 IDI2Q9BXS1 227 aa23.33■■□□□ 1.33
CAPN1-206ENST00000526966 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
CAPN1-206ENST00000526966 LRRFIP2Q9Y608 721 aaKnown RBP23.33■■□□□ 1.33
CAPN1-206ENST00000526966 ZFPM1Q8IX07 1006 aa23.32■■□□□ 1.32
CAPN1-206ENST00000526966 TRIM47Q96LD4 638 aa23.32■■□□□ 1.32
CAPN1-206ENST00000526966 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
CAPN1-206ENST00000526966 NOB1Q9ULX3 412 aaKnown RBP23.32■■□□□ 1.32
CAPN1-206ENST00000526966 PA2G4Q9UQ80 394 aaKnown RBP23.32■■□□□ 1.32
CAPN1-206ENST00000526966 PDS5AQ29RF7 1337 aaKnown RBP23.32■■□□□ 1.32
CAPN1-206ENST00000526966 CXCL11O14625 94 aa23.31■■□□□ 1.32
CAPN1-206ENST00000526966 ENTPD3O75355 529 aa23.31■■□□□ 1.32
CAPN1-206ENST00000526966 ADORA1P30542 326 aa23.31■■□□□ 1.32
CAPN1-206ENST00000526966 PSMC4P43686 418 aa23.31■■□□□ 1.32
CAPN1-206ENST00000526966 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
CAPN1-206ENST00000526966 ZGPATQ8N5A5 531 aaKnown RBP23.31■■□□□ 1.32
CAPN1-206ENST00000526966 API5Q9BZZ5 524 aaKnown RBP23.31■■□□□ 1.32
CAPN1-206ENST00000526966 HDAC5Q9UQL6 1122 aa23.31■■□□□ 1.32
CAPN1-206ENST00000526966 PHF20L1A8MW92 1017 aa23.3■■□□□ 1.32
CAPN1-206ENST00000526966 MYCP01106 439 aaPredicted RBP23.3■■□□□ 1.32
CAPN1-206ENST00000526966 OSBPP22059 807 aa23.3■■□□□ 1.32
CAPN1-206ENST00000526966 GPAT2Q6NUI2 795 aa23.3■■□□□ 1.32
CAPN1-206ENST00000526966 TRIOBPQ9H2D6 2365 aa23.29■■□□□ 1.32
CAPN1-206ENST00000526966 RGS3P49796 1198 aa23.29■■□□□ 1.32
CAPN1-206ENST00000526966 RASGRF1Q13972 1273 aa23.29■■□□□ 1.32
CAPN1-206ENST00000526966 PARK7Q99497 189 aaKnown RBP23.29■■□□□ 1.32
CAPN1-206ENST00000526966 BCRP11274 1271 aa23.28■■□□□ 1.32
CAPN1-206ENST00000526966 HOXD10P28358 340 aa23.28■■□□□ 1.32
CAPN1-206ENST00000526966 MAP3K10Q02779 954 aa23.28■■□□□ 1.32
CAPN1-206ENST00000526966 SH3BP5LQ7L8J4 393 aa23.28■■□□□ 1.32
CAPN1-206ENST00000526966 SCYL3Q8IZE3 742 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms