RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 LDLRAD1Q5T700 205 aa15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 TBC1D22AQ8WUA7 517 aa15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 MRIQ9BWK5 157 aa15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 COL1A1P02452 1464 aaPredicted RBP15.39■□□□□ 0.05
SSSCA1-203ENST00000526877 MYO1BO43795 1136 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 SDSP20132 328 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 NF2P35240 595 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 CRKP46108 304 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 RBM5P52756 815 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 HDLBPQ00341 1268 aaKnown RBP15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 TTC39AQ5SRH9 613 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 TDRD3Q9H7E2 651 aaKnown RBP15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 ZNF70Q9UC06 446 aaPredicted RBP15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 PPP2R3BQ9Y5P8 575 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 AKAP11Q9UKA4 1901 aa15.38■□□□□ 0.05
SSSCA1-203ENST00000526877 SSC5DA1L4H1 1573 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 FRAT2O75474 233 aaPredicted RBP15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 ADORA1P30542 326 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 PRKG1Q13976 671 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 TTLL12Q14166 644 aaPredicted RBP15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 MAP3K11Q16584 847 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 NBPF12Q5TAG4 269 aaPredicted RBP15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 BOLA2Q9H3K6 86 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 RNF186Q9NXI6 227 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 FZD1Q9UP38 647 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 MYH13Q9UKX3 1938 aa15.37■□□□□ 0.05
SSSCA1-203ENST00000526877 ZBTB22O15209 634 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 CDC45O75419 566 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 RASA3Q14644 834 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 CASC1Q6TDU7 716 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 ARMC9Q7Z3E5 817 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 ANGEL1Q9UNK9 670 aaKnown RBP15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
SSSCA1-203ENST00000526877 EIF5BO60841 1220 aaKnown RBP15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 UQCRFS1P1P0C7P4 283 aa15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 ZNF512BQ96KM6 892 aaPredicted RBP15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 TEPSINQ96N21 525 aa15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 SAGE1Q9NXZ1 904 aa15.35■□□□□ 0.05
SSSCA1-203ENST00000526877 USP2O75604 605 aaPredicted RBP15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 TRPA1O75762 1119 aa15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 SUPT20HL1Q3ZLR7 823 aa15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 CCDC102BQ68D86 513 aa15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 APOBEC3HQ6NTF7 200 aaKnown RBP15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 WDR66Q8TBY9 1149 aa15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 ZDHHC15Q96MV8 337 aa15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 HAUS7Q99871 368 aa15.34■□□□□ 0.05
SSSCA1-203ENST00000526877 CAPN15O75808 1086 aa15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 PHKA1P46020 1223 aa15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 TM4SF4P48230 202 aa15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 HHIPL2Q6UWX4 724 aa15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 CDAN1Q8IWY9 1227 aa15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 TEKT1Q969V4 418 aa15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 DNAJC2Q99543 621 aaKnown RBP15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
SSSCA1-203ENST00000526877 UNCXA6NJT0 531 aa15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 PPP1R12BO60237 982 aaPredicted RBP15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 ARID4AP29374 1257 aaPredicted RBP15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
SSSCA1-203ENST00000526877 HIP1O00291 1037 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 SEMA3EO15041 775 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 PRDX5P30044 214 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 TBC1D9Q6ZT07 1266 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 SLC10A4Q96EP9 437 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 TMEM39BQ9GZU3 492 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 PAG1Q9NWQ8 432 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 MAST3O60307 1309 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
SSSCA1-203ENST00000526877 LAMB1P07942 1786 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 CACNB3P54284 484 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 FKBP1CQ5VVH2 108 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 TICAM2Q86XR7 235 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 ABHD8Q96I13 439 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 DENND2AQ9ULE3 1009 aa15.3■□□□□ 0.04
SSSCA1-203ENST00000526877 GOLIM4O00461 696 aa15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 IREB2P48200 963 aaKnown RBP15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 TNNI2P48788 182 aa15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 RASGRF1Q13972 1273 aa15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 TTF1Q15361 905 aaPredicted RBP15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 LRRFIP1Q32MZ4 808 aaKnown RBP15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 DAGLAQ9Y4D2 1042 aa15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
SSSCA1-203ENST00000526877 PDS5AQ29RF7 1337 aaKnown RBP15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 CHMLP26374 656 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 GJA5P36382 358 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 MCAMP43121 646 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms