RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 DCAF15Q66K64 600 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 C17orf99Q6UX52 265 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 CHRDL2Q6WN34 429 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 CCDC84Q86UT8 332 aaPredicted RBP8.24□□□□□ -1.09
CD44-221ENST00000526000 VGLL2Q8N8G2 317 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 RAET1EQ8TD07 263 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 SSH1Q8WYL5 1049 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 TRIM47Q96LD4 638 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 TAOK2Q9UL54 1235 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 DAGLAQ9Y4D2 1042 aa8.24□□□□□ -1.09
CD44-221ENST00000526000 MYH3P11055 1940 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 EYA2O00167 538 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 SLC5A1P13866 664 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 FGFR2P21802 821 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 PRDX5P30044 214 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 PUM3Q15397 648 aaKnown RBP8.23□□□□□ -1.09
CD44-221ENST00000526000 RABL6Q3YEC7 729 aaPredicted RBP8.23□□□□□ -1.09
CD44-221ENST00000526000 NCBP3Q53F19 620 aaKnown RBP8.23□□□□□ -1.09
CD44-221ENST00000526000 HHIPL2Q6UWX4 724 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 GADL1Q6ZQY3 521 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 FAM83AQ86UY5 434 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 ZSCAN29Q8IWY8 852 aaPredicted RBP8.23□□□□□ -1.09
CD44-221ENST00000526000 FAM151AQ8WW52 585 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 GABRQQ9UN88 632 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 PA2G4Q9UQ80 394 aaKnown RBP8.23□□□□□ -1.09
CD44-221ENST00000526000 UTYO14607 1347 aa8.23□□□□□ -1.09
CD44-221ENST00000526000 ZNF646O15015 1829 aaPredicted RBP8.22□□□□□ -1.09
CD44-221ENST00000526000 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
CD44-221ENST00000526000 CCL5P13501 91 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 HOXD10P28358 340 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 ADORA1P30542 326 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 GRK4P32298 578 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 PHKA1P46020 1223 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 RFX5P48382 616 aaPredicted RBP8.22□□□□□ -1.09
CD44-221ENST00000526000 PPATQ06203 517 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 DIEXFQ68CQ4 756 aaKnown RBP8.22□□□□□ -1.09
CD44-221ENST00000526000 GPAT2Q6NUI2 795 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 ATG9AQ7Z3C6 839 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 WDR66Q8TBY9 1149 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 MRIQ9BWK5 157 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 RNF208Q9H0X6 261 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 CEP126Q9P2H0 1117 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.22□□□□□ -1.09
CD44-221ENST00000526000 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 SRRDQ9UH36 339 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 ZHX2Q9Y6X8 837 aa8.22□□□□□ -1.09
CD44-221ENST00000526000 ELNP15502 786 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 RGS3P49796 1198 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 TIMM10P62072 90 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 PRKCZQ05513 592 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 PICALMQ13492 652 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 MOGSQ13724 837 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 ATP2B3Q16720 1220 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 FKBP1CQ5VVH2 108 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 LPIN2Q92539 896 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 HOOK2Q96ED9 719 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 UNC93B1Q9H1C4 597 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
CD44-221ENST00000526000 ABCF2Q9UG63 623 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 ZNF112Q9UJU3 913 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 MYPNQ86TC9 1320 aa8.21□□□□□ -1.1
CD44-221ENST00000526000 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
CD44-221ENST00000526000 TFRCP02786 760 aaKnown RBP8.2□□□□□ -1.1
CD44-221ENST00000526000 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
CD44-221ENST00000526000 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CD44-221ENST00000526000 GNL3LQ9NVN8 582 aaKnown RBP8.2□□□□□ -1.1
CD44-221ENST00000526000 NOB1Q9ULX3 412 aaKnown RBP8.2□□□□□ -1.1
CD44-221ENST00000526000 KCNH4Q9UQ05 1017 aa8.2□□□□□ -1.1
CD44-221ENST00000526000 SUGT1Q9Y2Z0 365 aa8.2□□□□□ -1.1
CD44-221ENST00000526000 LRRFIP2Q9Y608 721 aaKnown RBP8.2□□□□□ -1.1
CD44-221ENST00000526000 MAST3O60307 1309 aa8.2□□□□□ -1.1
CD44-221ENST00000526000 DDTLA6NHG4 134 aaPredicted RBP8.19□□□□□ -1.1
CD44-221ENST00000526000 TRIM75PA6NK02 468 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 ADCY3O60266 1144 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 UBTFL1P0CB47 393 aaPredicted RBP8.19□□□□□ -1.1
CD44-221ENST00000526000 PTPRAP18433 802 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 FLT3LGP49771 235 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 PRMT2P55345 433 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 FCGRTP55899 365 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 UBXN2AP68543 259 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 NEUROD6Q96NK8 337 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 PARK7Q99497 189 aaKnown RBP8.19□□□□□ -1.1
CD44-221ENST00000526000 DDX4Q9NQI0 724 aaKnown RBP8.19□□□□□ -1.1
CD44-221ENST00000526000 SMC4Q9NTJ3 1288 aa8.19□□□□□ -1.1
CD44-221ENST00000526000 PHF20L1A8MW92 1017 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 CCER2I3L3R5 266 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 CXCL11O14625 94 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 PEX10O60683 326 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 GNRH1P01148 92 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 GJB1P08034 283 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 BCRP11274 1271 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 BTDP43251 543 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 SLFN5Q08AF3 891 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 CCDC102BQ68D86 513 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 TBC1D9Q6ZT07 1266 aa8.18□□□□□ -1.1
CD44-221ENST00000526000 DZIP1Q86YF9 867 aaKnown RBP8.18□□□□□ -1.1
CD44-221ENST00000526000 SCYL3Q8IZE3 742 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms