RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 ZFPM1Q8IX07 1006 aa14.94□□□□□ -0.02
SSBP3-210ENST00000525990 NEUROD6Q96NK8 337 aa14.94□□□□□ -0.02
SSBP3-210ENST00000525990 GNL3LQ9NVN8 582 aaKnown RBP14.94□□□□□ -0.02
SSBP3-210ENST00000525990 TMOD2Q9NZR1 351 aa14.94□□□□□ -0.02
SSBP3-210ENST00000525990 DENND2AQ9ULE3 1009 aa14.94□□□□□ -0.02
SSBP3-210ENST00000525990 SLURP2P0DP57 97 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 MIGA2Q7L4E1 593 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 FAM83AQ86UY5 434 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 ZKSCAN4Q969J2 545 aaPredicted RBP14.93□□□□□ -0.02
SSBP3-210ENST00000525990 OTUD5Q96G74 571 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 MS4A4AQ96JQ5 239 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 WRNIP1Q96S55 665 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 FAM198AQ9UFP1 575 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 ABCF2Q9UG63 623 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 PHIPQ8WWQ0 1821 aa14.93□□□□□ -0.02
SSBP3-210ENST00000525990 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
SSBP3-210ENST00000525990 ATAD5Q96QE3 1844 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 PTPRFP10586 1907 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 UNCXA6NJT0 531 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 SEMA3EO15041 775 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 CAP1Q01518 475 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 POLA2Q14181 598 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 FKBP1CQ5VVH2 108 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 ITPRIPQ8IWB1 547 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 CFHR5Q9BXR6 569 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 USP40Q9NVE5 1235 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 HMG20BQ9P0W2 317 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 RFX7Q2KHR2 1363 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 DOCK1Q14185 1865 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 SIPA1L1O43166 1804 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
SSBP3-210ENST00000525990 INPP5BP32019 993 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 SOX10P56693 466 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 CRHR2Q13324 411 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
SSBP3-210ENST00000525990 PANK1Q8TE04 598 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 FAM151AQ8WW52 585 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 AKAP2Q9Y2D5 859 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 GAKO14976 1311 aa14.91□□□□□ -0.02
SSBP3-210ENST00000525990 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-210ENST00000525990 ZBTB7BO15156 539 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-210ENST00000525990 FKTNO75072 461 aa14.9□□□□□ -0.02
SSBP3-210ENST00000525990 MCAMP43121 646 aa14.9□□□□□ -0.02
SSBP3-210ENST00000525990 INHBEP58166 350 aa14.9□□□□□ -0.02
SSBP3-210ENST00000525990 G3BP1Q13283 466 aaKnown RBP eCLIP14.9□□□□□ -0.02
SSBP3-210ENST00000525990 MVPQ14764 893 aaKnown RBP14.9□□□□□ -0.02
SSBP3-210ENST00000525990 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
SSBP3-210ENST00000525990 HPS5Q9UPZ3 1129 aa14.9□□□□□ -0.02
SSBP3-210ENST00000525990 CSADQ9Y600 493 aa14.9□□□□□ -0.02
SSBP3-210ENST00000525990 ATRNL1Q5VV63 1379 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 CCL15-CCL14A0A0B4J2E2 113 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 SPDYE5A6NIY4 337 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 ATP8B2P98198 1209 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 MECOMQ03112 1051 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 CCL15Q16663 113 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 NOM1Q5C9Z4 860 aaKnown RBP14.89□□□□□ -0.03
SSBP3-210ENST00000525990 SH3BP5LQ7L8J4 393 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 DZIP1Q86YF9 867 aaKnown RBP14.89□□□□□ -0.03
SSBP3-210ENST00000525990 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
SSBP3-210ENST00000525990 DDX4Q9NQI0 724 aaKnown RBP14.89□□□□□ -0.03
SSBP3-210ENST00000525990 PDS5AQ29RF7 1337 aaKnown RBP14.89□□□□□ -0.03
SSBP3-210ENST00000525990 IRF6O14896 467 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 ZBTB22O15209 634 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 WDHD1O75717 1129 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-210ENST00000525990 ALDH1A1P00352 501 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 ARID4AP29374 1257 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-210ENST00000525990 BTDP43251 543 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 RGS3P49796 1198 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 GORABQ5T7V8 394 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 SPATA5Q8NB90 893 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 CD99L2Q8TCZ2 262 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 DBNDD2Q9BQY9 259 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 ZNF341Q9BYN7 854 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 SNRKQ9NRH2 765 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 MROH7-TTC4A0A0A0MT08 1334 aa14.88□□□□□ -0.03
SSBP3-210ENST00000525990 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
SSBP3-210ENST00000525990 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
SSBP3-210ENST00000525990 RGS19P49795 217 aa14.87□□□□□ -0.03
SSBP3-210ENST00000525990 PICALMQ13492 652 aa14.87□□□□□ -0.03
SSBP3-210ENST00000525990 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
SSBP3-210ENST00000525990 DCAF15Q66K64 600 aa14.87□□□□□ -0.03
SSBP3-210ENST00000525990 ERO1BQ86YB8 467 aa14.87□□□□□ -0.03
SSBP3-210ENST00000525990 ZGPATQ8N5A5 531 aaKnown RBP14.87□□□□□ -0.03
SSBP3-210ENST00000525990 TLR7Q9NYK1 1049 aaKnown RBP14.87□□□□□ -0.03
SSBP3-210ENST00000525990 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
SSBP3-210ENST00000525990 GTF2A2P52657 109 aa14.86□□□□□ -0.03
SSBP3-210ENST00000525990 RHBDL3P58872 404 aa14.86□□□□□ -0.03
SSBP3-210ENST00000525990 OS9Q13438 667 aaPredicted RBP14.86□□□□□ -0.03
SSBP3-210ENST00000525990 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
SSBP3-210ENST00000525990 OTOP1Q7RTM1 612 aa14.86□□□□□ -0.03
SSBP3-210ENST00000525990 NSUN4Q96CB9 384 aaKnown RBP14.86□□□□□ -0.03
SSBP3-210ENST00000525990 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.86□□□□□ -0.03
SSBP3-210ENST00000525990 TRIM17Q9Y577 477 aa14.86□□□□□ -0.03
SSBP3-210ENST00000525990 MGAMO43451 1857 aa14.86□□□□□ -0.03
SSBP3-210ENST00000525990 MLLT1Q03111 559 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms